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BioLiP

Structure of PDB 3qzw Chain D Binding Site BS01

Receptor Information
>3qzw Chain D (length=274) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAP
WIEQEGPEYWDEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFG
CDVGSDGRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQITKRKWEAA
HVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVP
SGEEQRYTCHVQHEGLPKPLTLRW
Ligand information
>3qzw Chain F (length=10) Species: 11676 (Human immunodeficiency virus 1) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
RYPLTFGWCF
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3qzw Plasticity of human CD8alpha alpha binding to peptide-HLA-A*2402
Resolution2.798 Å
Binding residue
(original residue number in PDB)		Y7 E63 K66 V67 H70 N77 Y84 M97 F99 H114 Y116 Y123 T143 K146 W147 Q156 Y159 R170 Y171
Binding residue
(residue number reindexed from 1)		Y7 E63 K66 V67 H70 N77 Y84 M97 F99 H114 Y116 Y123 T143 K146 W147 Q156 Y159 R170 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:3qzw, PDBe:3qzw, PDBj:3qzw
PDBsum3qzw
PubMed21645925
UniProtP04439|HLAA_HUMAN HLA class I histocompatibility antigen, A alpha chain (Gene Name=HLA-A)

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