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Structure of PDB 6o8q Chain A Binding Site BS01

Receptor Information
>6o8q Chain A (length=75) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GMNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGT
FKVNHRAAANVPAFVSGKALKDAVK
Ligand information
>6o8q Chain L (length=57) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aatttcaattatccccttaaaattttataaccatataaataaaaatatct
aaccccc
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6o8q Nucleoid remodeling during environmental adaptation is regulated by HU-dependent DNA bundling.
Resolution3.216 Å
Binding residue
(original residue number in PDB)
V45 G46 K83
Binding residue
(residue number reindexed from 1)
V46 G47 K68
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0042802 identical protein binding
Biological Process
GO:0006270 DNA replication initiation
GO:0006281 DNA repair
GO:0006351 DNA-templated transcription
GO:0006974 DNA damage response
GO:0030261 chromosome condensation
GO:0036386 bacterial nucleoid packaging
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0009295 nucleoid
GO:0016020 membrane
GO:1990103 DnaA-HU complex
GO:1990178 HU-DNA complex

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:6o8q, PDBe:6o8q, PDBj:6o8q
PDBsum6o8q
PubMed32518228
UniProtP0ACF0|DBHA_ECOLI DNA-binding protein HU-alpha (Gene Name=hupA)

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