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Structure of PDB 4oi1 Chain A Binding Site BS01

Receptor Information >4oi1 Chain A (length=395) Species: 6239 (Caenorhabditis elegans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] ENVQEFVLKEDCELRFAAGDDSDVCLELVKGYAEIFGTELLLNKKYTFPA KSRVAAFTWKGATIELVGTTESAYVAESTPMVIYLNIHAAMEEVRKKREE QAKAKGPRLLLVGPTDVGKTTVSRILCNYSVRQGRTPIFVELDVGQNSVS VPGTVAAVLVQKTADVIDGFERNQPIVFNFGHTSPSANLSLYEALFKEMA TTLNAQIQENDEAKIGGMIINTCGWVDGEGYKCIVKAASAFEVDVVIVLD HERLYSDLSKELPEFVRLTHVPKSGGVEQRTGQIRSKMRGENVHRYFYGT RANNLYPFTFDVSFDDVTLCKIGKLVIMEPSADIKHHLFAFSRSTKADEN VLKSPVFGFCLVTEVDLEKRTMSILCPQRTIPSKVLVFSDITHLD

Ligand information >4oi1 Chain B (length=2) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] gc ..

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 4oi1 RNA specificity and regulation of catalysis in the eukaryotic polynucleotide kinase clp1. Resolution 2.3 Å Binding residue (original residue number in PDB) D151 G153 T191 S192 S194 C231 G232 W233 R293 R297 Binding residue (residue number reindexed from 1) D143 G145 T183 S184 S186 C223 G224 W225 R285 R289

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0005524 ATP binding GO:0051731 polynucleotide 5'-hydroxyl-kinase activity GO:0051736 ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity

	Biological Process
GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006396	RNA processing
GO:0006397	mRNA processing
GO:0031124	mRNA 3'-end processing

	Cellular Component
GO:0005634	nucleus
GO:0005849	mRNA cleavage factor complex

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