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Structure of PDB 1qz9 Chain A Binding Site BS01

Receptor Information
>1qz9 Chain A (length=404) Species: 294 (Pseudomonas fluorescens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TTRNDCLALDAQDSLAPLRQQFALPEGVIYLDGNSLGARPVAALARAQAV
IAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINL
FKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRL
VDSPEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWD
LAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQ
PLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQT
DMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE
GYAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR
KTWA
Ligand information
Ligand IDPLP
InChIInChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)
InChIKeyNGVDGCNFYWLIFO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341Cc1ncc(CO[P](O)(O)=O)c(C=O)c1O
OpenEye OEToolkits 1.5.0Cc1c(c(c(cn1)COP(=O)(O)O)C=O)O
ACDLabs 10.04O=P(O)(O)OCc1cnc(c(O)c1C=O)C
FormulaC8 H10 N O6 P
NamePYRIDOXAL-5'-PHOSPHATE;
VITAMIN B6 Phosphate
ChEMBLCHEMBL82202
DrugBankDB00114
ZINCZINC000001532514
PDB chain1qz9 Chain A Residue 1227 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1qz9 Three-Dimensional Structure of Kynureninase from Pseudomonas fluorescens.
Resolution1.85 Å
Binding residue
(original residue number in PDB)
T96 T97 S98 F129 D132 T172 D201 A203 H204 C224 Y226 K227
Binding residue
(residue number reindexed from 1)
T95 T96 S97 F128 D131 T171 D200 A202 H203 C223 Y225 K226
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) F129 D201 Y226 K227 R375
Catalytic site (residue number reindexed from 1) F128 D200 Y225 K226 R374
Enzyme Commision number 3.7.1.3: kynureninase.
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0030170 pyridoxal phosphate binding
GO:0030429 kynureninase activity
Biological Process
GO:0006569 tryptophan catabolic process
GO:0009435 NAD biosynthetic process
GO:0019363 pyridine nucleotide biosynthetic process
GO:0019441 tryptophan catabolic process to kynurenine
GO:0019805 quinolinate biosynthetic process
GO:0034354 'de novo' NAD biosynthetic process from tryptophan
GO:0043420 anthranilate metabolic process
GO:0097053 L-kynurenine catabolic process
Cellular Component
GO:0005737 cytoplasm

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Cellular Component
External links
PDB RCSB:1qz9, PDBe:1qz9, PDBj:1qz9
PDBsum1qz9
PubMed14756555
UniProtP83788|KYNU_PSEFL Kynureninase (Gene Name=kynU)

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