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BioLiP

Structure of PDB 1akj Chain A Binding Site BS01

Receptor Information
>1akj Chain A (length=276) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAP
WIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG
CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAA
HVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT
LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVP
SGQEQRYTCHVQHEGLPKPLTLRWEP
Ligand information
>1akj Chain C (length=9) Species: 12721 (Human immunodeficiency virus) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ILKEPVHGV
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1akj Crystal structure of the complex between human CD8alpha(alpha) and HLA-A2.
Resolution2.65 Å
Binding residue
(original residue number in PDB)		Y7 F9 E63 R65 K66 V67 H70 T73 D77 Y99 Y116 T143 W147 V152 Q155 L156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)		Y7 F9 E63 R65 K66 V67 H70 T73 D77 Y99 Y116 T143 W147 V152 Q155 L156 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:1akj, PDBe:1akj, PDBj:1akj
PDBsum1akj
PubMed9177355
UniProtP04439|HLAA_HUMAN HLA class I histocompatibility antigen, A alpha chain (Gene Name=HLA-A)

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