Structure of PDB 8wmv Chain n

Receptor sequence

>8wmvn (length=181) Species: 52970 (Rhodomonas salina)

LWNEGKIQGKGVSVIPLFPRPASLDGTFPGDQGFDPFGFSSWVNMKFVAE
AEIKHCRLAMLAFAGIMVESAGISFPGATSVLGSSKNIFEIHDKAVASGA
MGQILLWVSFFEVVAGVPAMNEMLNGESSRIPGYYAFDPLGQGKGDKMGR
MQLSEIQNGRLAMLAVSGIVHHTLITGKGPL

3D structure

• PDB: 8wmv Growth phase-dependent reorganization of cryptophyte photosystem I antennae.
• Chain: n
• Resolution: 2.94 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CLA	n	V51 P53	V14 P16
BS02	CLA	n	D68 Q69 G70 F71 D72 F76 M82 V85 A86 E89 H92 R197 M200	D31 Q32 G33 F34 D35 F39 M45 V48 A49 E52 H55 R160 M163
BS03	CLA	n	W79 V85 H92	W42 V48 H55
BS04	CLA	n	L98 G102 V105 E106 S111 F112 A115 M138	L61 G65 V68 E69 S74 F75 A78 M101
BS05	CLA	n	F112 P113 G114 V118 L119	F75 P76 G77 V81 L82
BS06	CLA	n	G136 A137 Q140 W144	G99 A100 Q103 W107
BS07	CLA	n	H129 V133 M138 G139 L142	H92 V96 M101 G102 L105
BS08	CLA	n	F84 A88 K91 H92 L95 S146 E149 V154 M157	F47 A51 K54 H55 L58 S109 E112 V117 M120
BS09	CLA	n	R94 M97 L98 A101 G170 Y171 Y172 F174 D175 Q179 K184 M188 Q189 E192	R57 M60 L61 A64 G133 Y134 Y135 F137 D138 Q142 K147 M151 Q152 E155
BS10	CLA	n	R187 L190 S191 Q194 N195 L198	R150 L153 S154 Q157 N158 L161
BS11	KC2	n	R187 S191 N195	R150 S154 N158
BS12	KC2	n	G205 H208 H209 I212	G168 H171 H172 I175
BS13	CLA	n	H208 L211 I212	H171 L174 I175
BS14	II0	n	M97 F100 F174 P176 L198 A199 A202 I206 H209	M60 F63 F137 P139 L161 A162 A165 I169 H172
BS15	II0	n	D72 P73 F74 F76 H92 A99 E106 I125 H129	D35 P36 F37 F39 H55 A62 E69 I88 H92
BS16	II0	n	Q69 R197 L198 L201	Q32 R160 L161 L164
BS17	IHT	n	F71 F126 H129 S204 V207 H208	F34 F89 H92 S167 V170 H171
BS18	II0	n	K91 L95 I141 V145 F148	K54 L58 I104 V108 F111

External links

• PDB: RCSB:8wmv, PDBe:8wmv, PDBj:8wmv
• PDBsum: 8wmv
• PubMed: 38734819