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Structure of PDB 8xjv Chain c

Receptor sequence

>8xjvc (length=106) Species: 8355 (Xenopus laevis)

PATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK
TDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARR
IRGERA

3D structure

• PDB: 8xjv Structural basis for linker histone H5-nucleosome binding and chromatin fiber compaction.
• Chain: c
• Resolution: 3.6 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	dna	c	H572 R573 Y574 P576 G577 V579 R586 R602	H10 R11 Y12 P14 G15 V17 R24 R40
BS02	dna	c	K570 R573 Y574 R575 T578 R582 R596 R605 R616 Q618 R649 V650 T651 M653	K8 R11 Y12 R13 T16 R20 R34 R43 R54 Q56 R87 V88 T89 M91

External links

• PDB: RCSB:8xjv, PDBe:8xjv, PDBj:8xjv
• PDBsum: 8xjv
• PubMed: 39103524
• UniProt: A0A310TTQ1

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