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BioLiP

Structure of PDB 1w2b Chain R

Receptor sequence
>1w2bR (length=84) Species: 2238 (Haloarcula marismortui) [Search protein sequence]
SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVE
QVNTQNTMDGEKKAVVRLSEDDDAQEVASRIGVF
3D structure
PDB1w2b Trigger Factor in Complex with the Ribosome Forms a Molecular Cradle for Nascent Proteins
ChainR
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna R S1 H9 T11 K13 Q21 K23 R31 S33 K34 N53 T54 Q55 N56 M58 K62 S1 H9 T11 K13 Q21 K23 R31 S33 K34 N53 T54 Q55 N56 M58 K62 PDBbind-CN: Kd=1.2uM
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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External links
PDB RCSB:1w2b, PDBe:1w2b, PDBj:1w2b
PDBsum1w2b
PubMed15334087
UniProtP12732|RL23_HALMA Large ribosomal subunit protein uL23 (Gene Name=rpl23)

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