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BioLiP

Structure of PDB 1n8r Chain L

Receptor sequence
>1n8rL (length=132) Species: 2238 (Haloarcula marismortui) [Search protein sequence]
MEALGADVTQGLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLG
DKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDE
NEDPRGTELKGPIAREVAQRFGSVASAATMIV
3D structure
PDB1n8r Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit
ChainL
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna L M1 A3 T9 G11 E13 S16 K30 I32 S33 H35 G36 Y37 S38 G39 T40 K41 N42 R43 H44 S56 R66 V68 R77 K78 R81 R87 M1 A3 T9 G11 E13 S16 K30 I32 S33 H35 G36 Y37 S38 G39 T40 K41 N42 R43 H44 S56 R66 V68 R77 K78 R81 R87
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:1n8r, PDBe:1n8r, PDBj:1n8r
PDBsum1n8r
PubMed12860128
UniProtP22450|RL14_HALMA Large ribosomal subunit protein uL14 (Gene Name=rpl14)

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