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Structure of PDB 6dmf Chain J

Receptor sequence
>6dmfJ (length=512) Species: 411476 (Bacteroides ovatus ATCC 8483) [Search protein sequence]
DPNAQLTTAQLQTYGDLSMMEIYRNYHYAFTQQLMGCWNTTNYGGRHTLD
NNEMSRIWTSFYTQSLKNIIDAQYRTAEDAEKVNINSVLRIYRVYLMSII
TDTYGDAPFSEAGFNPKYDKQEDIYNAFFLELEDAVNKIDPTKDKVTGDL
IYAGDVTKWQQLANSLRLRFAMRISSVNPTKAQTEFENALAANGGVITDA
SSDALIKYMTIAFSFGQEAYSDYRGNSLSQLLFGNDPANNPSYLCSTFFN
QLYNSGDPRTFKISRCYYDGLMSATSPDNRVDITQEMIEKGIAFSPRDPG
AYSWEPWPTGYDSDICAELAVNNPSVTATMAREVEPKLANNFLKSDNPGV
VMTSAEVKFLMAEATVKKWNVGSVSAEDLYKQGVRAAIDFLTDNYGCTAT
TDAEFDAFIQDKGAFGHTDNQKLEAINTQAWILHFTNPAECWANVRRSGY
PKLKSPAEYGFGQYLTGGTEIPVRLCYPVLESSYNKKSYNEAIERMGGTD
NWHSLLWWDTEN
3D structure
PDB6dmf Surface glycan-binding proteins are essential for cereal beta-glucan utilization by the human gut symbiont Bacteroides ovatus.
ChainJ
Resolution2.4 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC J E60 R95 E21 R56
BS02 BGC J N78 N281 N39 N235
BS03 MG J R492 D555 E557 R446 D509 E511
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