Structure of PDB 4ydv Chain H

Receptor sequence

>4ydvH (length=220) Species: 9606 (Homo sapiens) [Search protein sequence]

QVQLVQSGGGVFKPGGSLRLSCEASGFTFTEYYMTWVRQAPGKGLEWLAY
ISKNGEYSKYSPSSNGRFTISRDNAKNSVFLQLDRLSADDTAVYYCARAD
GLTYFSELLQYIFDLWGQGARVTVSSASTKGPSVFPLAPSGTAALGCLVK
DYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQT
YICNVNHKPSNTKVDKRVEP

3D structure

PDB

4ydv Human Non-neutralizing HIV-1 Envelope Monoclonal Antibodies Limit the Number of Founder Viruses during SHIV Mucosal Infection in Rhesus Macaques.

Chain

Resolution

2.7 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	H	Y32 Y33 K52A A95 D96 G97 L98 T99 Y100 L100E Q100F	Y32 Y33 K53 A99 D100 G101 L102 T103 Y104 L109 Q110
BS02	peptide	H	E31 L98	E31 L102

External links

PDB	RCSB:4ydv, PDBe:4ydv, PDBj:4ydv
PDBsum	4ydv
PubMed	26237403
UniProt	S6B291

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