Structure of PDB 6jjp Chain D

Receptor sequence

>6jjpD (length=220) Species: 9606 (Homo sapiens) [Search protein sequence]

EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVAT
ISGGGSYTYYPDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCASPD
SSGVAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYF
PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYIC
NVNHKPSNTKVDKKVEPKSC

3D structure

PDB

6jjp Identification of a monoclonal antibody that targets PD-1 in a manner requiring PD-1 Asn58 glycosylation.

Chain

Resolution

2.9 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	MAN	D	R72 N74	R72 N74
BS02	FUC	D	S31 G53 G54	S31 G53 G54

External links

PDB	RCSB:6jjp, PDBe:6jjp, PDBj:6jjp
PDBsum	6jjp
PubMed	31667366

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