Structure of PDB 1d1i Chain D

Receptor sequence
>1d1iD (length=69) Species: 562 (Escherichia coli) [Search protein sequence]
TPDCVTGKVEYTKYNDDDTFTVKVGDKELFTNRANLQSLLLSAQITGMTV
TIKTNACHNGGGFSEVIFR
3D structure
PDB1d1i Mutated Shiga-like Toxin B Subunit (W34A) Complexed with Receptor Gb3 Analogue
ChainD
Resolution1.7 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GAL D T454 N455 G462 T54 N55 G62
BS02 GLA D T431 N432 R433 F463 T31 N32 R33 F63
Gene Ontology
Biological Process
GO:0019836 hemolysis by symbiont of host erythrocytes
GO:0098676 modulation of host virulence by virus
Cellular Component
GO:0005576 extracellular region

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1d1i, PDBe:1d1i, PDBj:1d1i
PDBsum1d1i
PubMed
UniProtP69179|STXB_BPH19 Shiga-like toxin 1 subunit B (Gene Name=stxB)

[Back to BioLiP]