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Structure of PDB 8k6k Chain C

Receptor sequence

>8k6kC (length=413) Species: 376620 (Gluconobacter japonicus)

ISRGHYLAIAADCAACHTNGRDGQFLAGGYAISSPMGNIYSTNITPSKTH
GIGNYTLEQFSKALRHGIRADGAQLYPAMPYDAYNRLTDEDVKSLYAYIM
TEVKPVDAPSPKTQLPFPFSIRASLGIWKIAARIEGKPYVFDHTHNDDWN
RGRYLVDELAHCGECHTPRNFLLAPNQSAYLAGADIGSWRAPNITNAPQS
GIGSWSDQDLFQYLKTGKTAHARAAGPMAEAIEHSLQYLPDADISAIVTY
LRSVPAKAESGQTVANFEHAGRPSSYSVANANSRRSNSTLTKTTDGAALY
EAVCASCHQSDGKGSKDGYYPSLVGNTTTGQLNPNDLIASILYGVDRTTD
NHEILMPAFGPDSLVQPLTDEQIATIADYVLSHFGNAQATVSADAVKQVR
AGGKQVPLAKLAS

3D structure

• PDB: 8k6k Structural and electrochemical elucidation of biocatalytic mechanisms in direct electron transfer-type D-fructose dehydrogenase.
• Chain: C
• Resolution: 2.4 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	HEC	C	A261 R262 V342 C343 C346 H347 Y359 P360 L362 N365 T367 I380 V384 R386 I393 M395 F398 I415	A222 R223 V303 C304 C307 H308 Y320 P321 L323 N326 T328 I341 V345 R347 I354 M356 F359 I376
BS02	HEC	C	A199 C201 C204 H205 W228 R229 A230 P231 I233 I241 W244 Y252 M267 T366 D375	A160 C162 C165 H166 W189 R190 A191 P192 I194 I202 W205 Y213 M228 T327 D336
BS03	HEC	C	C52 C55 H56 I71 T81 I83 F99 R108 L114 Y115 M118 Y123 R161	C13 C16 H17 I32 T42 I44 F60 R69 L75 Y76 M79 Y84 R122
BS04	U10	C	M75 Y115 P116 F158 S163 I166 W167 L212 I225 L447 L450	M36 Y76 P77 F119 S124 I127 W128 L173 I186 L408 L411

External links

• PDB: RCSB:8k6k, PDBe:8k6k, PDBj:8k6k
• PDBsum: 8k6k
• UniProt: M1V1V5|FDHC_GLUJA Fructose dehydrogenase cytochrome subunit (Gene Name=fdhC)

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