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BioLiP

Structure of PDB 1n33 Chain C

Receptor sequence
>1n33C (length=206) Species: 274 (Thermus thermophilus) [Search protein sequence]
GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAG
LARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVAL
NVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKV
IVSGRIGGAEQARTEWAAQGRVPLHTLRANIDYGFALARTTYGVLGVKAY
IFLGEV
3D structure
PDB1n33 Selection of tRNA by the Ribosome Requires a Transition from an Open to a Closed Form
ChainC
Resolution3.35 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna C G2 N3 K4 I5 K27 S154 E161 Q162 A163 R172 V173 P174 H176 T177 L178 R179 T192 Y193 G194 V195 K199 G1 N2 K3 I4 K26 S153 E160 Q161 A162 R171 V172 P173 H175 T176 L177 R178 T191 Y192 G193 V194 K198 PDBbind-CN: Kd=86uM
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:1n33, PDBe:1n33, PDBj:1n33
PDBsum1n33
PubMed12464183
UniProtP80372|RS3_THET8 Small ribosomal subunit protein uS3 (Gene Name=rpsC)

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