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Structure of PDB 8apo Chain Bd

Receptor sequence
>8apoBd (length=221) Species: 353565 (Polytomella magna) [Search protein sequence]
VYRNSHTKRFSCRNSRLKYPFEQIWPTLQLSEDDAAMFRRNSRQFVVDLS
QNITLKNKFALNKATKIPHQDARALIYESNLHLDAVGEHPRYLKIRRVTS
QYGSKLMNVRKLRLLLGFKRRNFVQKLYEHTLLQQGSNKSWKVLCALEAK
MNLAVTRMGVAEDVLEATHDLRQNNVTLNGSPAQMKHARYLEPADVLAVS
AVSLIKQRICKGLFEVAPNTL
3D structure
PDB8apo Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites
ChainBd
Resolution3.2 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Bd Q173 N174 T177 G180 M185 K186 H187 A188 S200 A201 V202 S203 L204 Q173 N174 T177 G180 M185 K186 H187 A188 S200 A201 V202 S203 L204
BS02 rna Bd V1 R3 S5 R13 Y102 L106 R120 R121 N122 V1 R3 S5 R13 Y102 L106 R120 R121 N122
External links

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