Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP

Structure of PDB 6imw Chain B

Receptor sequence
>6imwB (length=494) Species: 28572 (Talaromyces funiculosus) [Search protein sequence]
EPSCRFAHQYTQEQVLQNPSKFINDVLFWEGKFHQNNISYNSGNGMSYDG
TNIDWVTGEGTVKHPFSAASKESLQVMLYAHAIAGSADAARFLSPNNPSA
APGIAASIMDTKLQTYLRFNETYPGFGGFLPWFTSSSQDLTPTWDWNNRV
PGLDNGELLWAVYAFIQAAENTSNKSFIDLAKKWQTWMDYTKTTAAHIFY
QGEGKVCAVTDIKNQSLPVYHPEQTYACEGTSYLNDPYQGELFTWWLQFF
GGLSDADIEALWEYKRPQLVSVDYHIGNVGPITVQKGYWFSSHETWKVLE
MPYYDIDIIRRVFQNAERARTCNSVVTQVPGMFASINNVTDPATGDVVGY
ISNAGIPSIANQTIQELDVITPYSVFPTVLFDKGVGMAWWRNMAIGKKMQ
NIYGSTESTRRDGTGVSALLTWDSKVSTVNAILGGVSGLVSQKMKAENIY
NTFVERIEAEYSRVFKNLKGEHVPFCLPQETVPDTGLVDFTTCN
3D structure
PDB6imw Identification, characterization, and structural analyses of a fungal endo-beta-1,2-glucanase reveal a new glycoside hydrolase family.
ChainB
Resolution2.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.71: glucan endo-1,2-beta-glucosidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 BGC B D259 Q262 Y311 H316 D236 Q239 Y288 H293
BS02 BGC B W155 D177 W132 D154
BS03 BGC B S93 K94 E180 Q262 W319 D446 S70 K71 E157 Q239 W296 D423
BS04 BGC B D72 F89 K94 D446 D49 F66 K71 D423
BS05 BGC B W155 W169 W132 W146
Gene Ontology
Molecular Function
GO:0033913 glucan endo-1,2-beta-glucosidase activity

View graph for
Molecular Function
External links

zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417