Structure of PDB 5fjz Chain B

Receptor sequence
>5fjzB (length=260) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
VPENNGILISIKEVINAEFSRDGTIHSSELKGVLELRINDHDLSHSNLKL
ADSIDVRDKSFQFKTHPNIDKQSFLSTKLISLRDKSKAFPANDQSLGVLR
WRKVAPAEDDSLIPLTLTTAVSPSESQQGFDVIIEYESVLETELADVIFT
IPVFPQEPVDINTESSSDAEVVNMDQEMGTSIKISKIAANDAGALAFTIE
APYEDALYPMTVSFQESTRDKLAKSFTGMAIQSVVMANDHDQELPYDVIT
SLKSDEYLVQ
3D structure
PDB5fjz Structural Basis for the Binding of Tryptophan-Based Motifs by Delta-Cop.
ChainB
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B K348 T349 H350 N352 K371 F373 P374 L380 G381 R384 K64 T65 H66 N68 K87 F89 P90 L96 G97 R100
BS02 peptide B F438 Q440 M464 F154 Q156 M178
Gene Ontology
Biological Process
GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Cellular Component
GO:0030126 COPI vesicle coat

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Biological Process
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Cellular Component
External links
PDB RCSB:5fjz, PDBe:5fjz, PDBj:5fjz
PDBsum5fjz
PubMed26578768
UniProtP43621|COPD_YEAST Coatomer subunit delta (Gene Name=RET2)

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