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BioLiP

Structure of PDB 9at6 Chain A

Receptor sequence
>9at6A (length=303) Species: 2697049 (Severe acute respiratory syndrome coronavirus 2) [Search protein sequence]
GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLN
PNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKY
KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFN
IDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTIT
VNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILG
PLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCS
GVT
3D structure
PDB9at6 Structure-Guided Design of Potent Coronavirus Inhibitors with a 2-Pyrrolidone Scaffold: Biochemical, Crystallographic, and Virological Studies.
ChainA
Resolution1.4 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 A1AGQ A F140 N142 C145 H163 H164 M165 E166 P168 Q189 T190 F139 N141 C144 H162 H163 M164 E165 P167 Q188 T189
BS02 A1AGR A F140 N142 G143 C145 H163 H164 M165 E166 P168 Q189 T190 F139 N141 G142 C144 H162 H163 M164 E165 P167 Q188 T189
External links
PDB RCSB:9at6, PDBe:9at6, PDBj:9at6
PDBsum9at6
PubMed38953866
UniProtP0DTD1|R1AB_SARS2 Replicase polyprotein 1ab (Gene Name=rep)

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