Structure of PDB 1c9b Chain E Binding Site BS04
Receptor Information
>1c9b Chain E (length=207) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAI
ASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLI
TTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIY
MASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPTDFKFDTP
VDKLPQL
Ligand information
>1c9b Chain O (length=18) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gggcgcctataaaagggg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1c9b
Structural basis of preinitiation complex assembly on human pol II promoters.
Resolution
2.65 Å
Binding residue
(original residue number in PDB)
S110 G153 A155
Binding residue
(residue number reindexed from 1)
S1 G44 A46
Enzymatic activity
Enzyme Commision number
2.3.1.48
: histone acetyltransferase.
Gene Ontology
Molecular Function
GO:0017025
TBP-class protein binding
Biological Process
GO:0006352
DNA-templated transcription initiation
GO:0070897
transcription preinitiation complex assembly
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1c9b
,
PDBe:1c9b
,
PDBj:1c9b
PDBsum
1c9b
PubMed
10619841
UniProt
Q00403
|TF2B_HUMAN Transcription initiation factor IIB (Gene Name=GTF2B)
[
Back to BioLiP
]