Structure of PDB 2vf8 Chain B Binding Site BS04

Receptor Information
>2vf8 Chain B (length=835) Species: 1299 (Deinococcus radiodurans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PDFPDGGFVQVRGARQHNLKDISVKVPRDALVVFTGVSGSGKSSLAFGTL
YAEAQRRYLESVSPYARRLFNQAGVPDVDAIDGLPPAVALQQARGTPTAR
SSVGSVTTLSNLLRMLYSRAGDYPPGQGIVYAEGFSPNTPEGACPECHGL
GRVYTVTEDSMVPDPSLTIRERAVAAWPQAWGGQNQRDILVTLGIDVDVP
WRELPEETRHWILFTDEQPVVPVYPGLTPAETQRALKKKMEPSYMGTFSS
ARRHVLHTFANTESASMKKRVQGYMISEECPLCHGKRLRQEALNVTFAGL
DITELSRLPLARVSELLRPYAEEREPGHAERVKNRPEQAIALQRMAADLV
KRLDVLLHLGLGYLGLDRSTPTLSPGELQRLRLATQLYSNLFGVVYVLDE
PSAGLHPADTEALLSALENLKRGGNSLFVVEHDLDVIRRADWLVDVGPEA
GEKGGEILYSGPPEGLKHVPESQTGQYLFADRHTEPHTPREPAGWLELNG
VTRNNLDNLDVRFPLGVMTSVTGVSGSGKSTLVSQALVDALAAHFGQPVN
PDPEDDEDPADHTAGSARLGGDLAQITRLVRVDQKPIGRTPRSNMATYTG
LFDQVRKLFAATPLAKKRGYNAGRFSFNVKGGRCEHCQGEGWVMVELLFL
PSVYAPCPVCHGTRYNAETLEVEYRGKNIADVLALTVDEAHDFFADESAI
FRALDTLREVGLGYLRLGQPATELSGGEAQRIKLATELRRSGRGGTVYVL
DEPTTGLHPADVERLQRQLVKLVDAGNTVIAVEHKMQVVAASDWVLDIGP
GAGEDGGRLVAQGTPAEVAQAAGSVTAPYLRAALR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain2vf8 Chain B Residue 1846 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2vf8 Structural and Mutational Analyses of Deinococcus Radiodurans Uvra2 Provide Insight Into DNA Binding and Damage Recognition by Uvras.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		C644 C664 C667
Binding residue
(residue number reindexed from 1)		C637 C657 C660
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004518 nuclease activity
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
GO:0042802 identical protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006281 DNA repair
GO:0006289 nucleotide-excision repair
Cellular Component
GO:0005737 cytoplasm
GO:0009380 excinuclease repair complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2vf8, PDBe:2vf8, PDBj:2vf8
PDBsum2vf8
PubMed19368888
UniProtQ9RYW8

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