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BioLiP

Structure of PDB 1yp3 Chain A Binding Site BS04

Receptor Information
>1yp3 Chain A (length=433) Species: 4113 (Solanum tuberosum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPV
SNCLNSNISKIYVLTQFNSASLNRHLSRAYEGFVEVLAAQQSPENPDWFQ
GTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITV
AALPMDEKRATAFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDD
KRAKEMPFIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSLGMR
VQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYL
PPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMG
ADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVKIINKD
NVQEAARETDGYFIKSGIVTVIKDALIPSGIII
Ligand information
Ligand IDSO4
InChIInChI=1S/H2O4S/c1-5(2,3)4/h(H2,1,2,3,4)/p-2
InChIKeyQAOWNCQODCNURD-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[O-]S(=O)(=O)[O-]
CACTVS 3.341[O-][S]([O-])(=O)=O
ACDLabs 10.04[O-]S([O-])(=O)=O
FormulaO4 S
NameSULFATE ION
ChEMBL
DrugBankDB14546
ZINC
PDB chain1yp3 Chain A Residue 1020 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1yp3 Crystal structure of potato tuber ADP-glucose pyrophosphorylase.
Resolution2.6 Å
Binding residue
(original residue number in PDB)		G29 G31 T32 R33 K43
Binding residue
(residue number reindexed from 1)		G20 G22 T23 R24 K34
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.7.27: glucose-1-phosphate adenylyltransferase.
Gene Ontology
Molecular Function
GO:0008878 glucose-1-phosphate adenylyltransferase activity
Biological Process
GO:0005978 glycogen biosynthetic process
GO:0009058 biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:1yp3, PDBe:1yp3, PDBj:1yp3
PDBsum1yp3
PubMed15692569
UniProtP23509|GLGS_SOLTU Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic

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