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BioLiP

Structure of PDB 1yp2 Chain C Binding Site BS03

Receptor Information
>1yp2 Chain C (length=432) Species: 4113 (Solanum tuberosum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QTCLDPDASRSVLGIILGGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNC
LNSNISKIYVLTQFNSASLNRHLSRAYASEGFVEVLAAQQSPENPDWFQG
TADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVA
ALPMDEKRATAFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDK
RAKEMPFIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSLGMRV
QAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLP
PSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGA
DYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVKIINKDN
VQEAARETDGYFIKSGIVTVIKDALIPSGIII
Ligand information
Ligand IDSO4
InChIInChI=1S/H2O4S/c1-5(2,3)4/h(H2,1,2,3,4)/p-2
InChIKeyQAOWNCQODCNURD-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[O-]S(=O)(=O)[O-]
CACTVS 3.341[O-][S]([O-])(=O)=O
ACDLabs 10.04[O-]S([O-])(=O)=O
FormulaO4 S
NameSULFATE ION
ChEMBL
DrugBankDB14546
ZINC
PDB chain1yp2 Chain C Residue 2010 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1yp2 Crystal structure of potato tuber ADP-glucose pyrophosphorylase.
Resolution2.11 Å
Binding residue
(original residue number in PDB)		R53 H84 Q314 R316
Binding residue
(residue number reindexed from 1)		R41 H72 Q295 R297
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.7.27: glucose-1-phosphate adenylyltransferase.
Gene Ontology
Molecular Function
GO:0008878 glucose-1-phosphate adenylyltransferase activity
Biological Process
GO:0005978 glycogen biosynthetic process
GO:0009058 biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:1yp2, PDBe:1yp2, PDBj:1yp2
PDBsum1yp2
PubMed15692569
UniProtP23509|GLGS_SOLTU Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic

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