Structure of PDB 4bew Chain B Binding Site BS03
Receptor Information
>4bew Chain B (length=994) Species:
9986
(Oryctolagus cuniculus) [
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MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLW
ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIA
NAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDI
VEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAV
NQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQ
QKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICS
DKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDK
PIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVE
KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSP
AKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIK
EWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGML
DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD
RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAM
TGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG
RAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTD
GLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVG
AAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMA
LSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYV
DPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYLED
Ligand information
Ligand ID
ACP
InChI
InChI=1S/C11H18N5O12P3/c12-9-6-10(14-2-13-9)16(3-15-6)11-8(18)7(17)5(27-11)1-26-31(24,25)28-30(22,23)4-29(19,20)21/h2-3,5,7-8,11,17-18H,1,4H2,(H,22,23)(H,24,25)(H2,12,13,14)(H2,19,20,21)/t5-,7-,8-,11-/m1/s1
InChIKey
UFZTZBNSLXELAL-IOSLPCCCSA-N
SMILES
Software
SMILES
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)C[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)CP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(CP(=O)(O)O)O)O)O)N
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(CP(=O)(O)O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@](O)(=O)C[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C11 H18 N5 O12 P3
Name
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER;
ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE
ChEMBL
CHEMBL133463
DrugBank
DB03909
ZINC
ZINC000008295124
PDB chain
4bew Chain B Residue 1007 [
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Receptor-Ligand Complex Structure
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PDB
4bew
Serca Bound to Phosphate Analogue
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
K205 F487 M494 K515 G516
Binding residue
(residue number reindexed from 1)
K205 F487 M494 K515 G516
Annotation score
3
Enzymatic activity
Catalytic site (original residue number in PDB)
D351 D703 D707
Catalytic site (residue number reindexed from 1)
D351 D703 D707
Enzyme Commision number
7.2.2.10
: P-type Ca(2+) transporter.
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0005215
transporter activity
GO:0005388
P-type calcium transporter activity
GO:0005509
calcium ion binding
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
GO:0046872
metal ion binding
Biological Process
GO:0006816
calcium ion transport
GO:0006874
intracellular calcium ion homeostasis
GO:0031448
positive regulation of fast-twitch skeletal muscle fiber contraction
GO:0070588
calcium ion transmembrane transport
GO:0106134
positive regulation of cardiac muscle cell contraction
GO:1901896
positive regulation of ATPase-coupled calcium transmembrane transporter activity
GO:1902082
positive regulation of calcium ion import into sarcoplasmic reticulum
GO:1990036
calcium ion import into sarcoplasmic reticulum
Cellular Component
GO:0016020
membrane
GO:0016529
sarcoplasmic reticulum
GO:0033017
sarcoplasmic reticulum membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4bew
,
PDBe:4bew
,
PDBj:4bew
PDBsum
4bew
PubMed
UniProt
P04191
|AT2A1_RABIT Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Gene Name=ATP2A1)
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