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Structure of PDB 7jt1 Chain o Binding Site BS02

Receptor Information
>7jt1 Chain o (length=116) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAA
STVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHG
RVQALADAAREAGLQF
Ligand information
>7jt1 Chain 2 (length=120) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ugccuggcggccguagcgcgguggucccaccugaccccaugccgaacuca
gaagugaaacgccguagcgccgaugguaguguggggucuccccaugcgag
aguagggaacugccaggcaa
.<<<<<<<<<.....<<<<<<<<....<<<<<<<.............>>>
>..>>>...>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>...
....>>...>>>>>>>>>..
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7jt1 ArfB can displace mRNA to rescue stalled ribosomes
Resolution3.3 Å
Binding residue
(original residue number in PDB)		K3 K4 R15 R25 H29 R30 T31 P32 R33 Y36 Q38 I40 G44 E46 V47 V54 E55 Y64 N67 K68 Q98 H100 G101 R102
Binding residue
(residue number reindexed from 1)		K2 K3 R14 R24 H28 R29 T30 P31 R32 Y35 Q37 I39 G43 E45 V46 V53 E54 Y63 N66 K67 Q97 H99 G100 R101
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7jt1, PDBe:7jt1, PDBj:7jt1
PDBsum7jt1
PubMed33144582
UniProtP0C018|RL18_ECOLI Large ribosomal subunit protein uL18 (Gene Name=rplR)

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