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BioLiP

Structure of PDB 2yzc Chain E Binding Site BS02

Receptor Information
>2yzc Chain E (length=287) Species: 1665 (Arthrobacter globiformis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TKVVLGQNQYGKAEVRLVKVTRNTARHEIQDLNVTSQLRGDFEAAHTAGD
NAHVVATDTQKNTVYAFARDGFATTEEFLLRLGKHFTEGFDWVTGGRWAA
QQFFWDRINDHDHAFSRNKSEVRTAVLEISGSEQAIVAGIEGLTVLKSTG
SEFHGFPRDKYTTLQETTDRILATDVSARWRYNTVEVDFDAVYASVRGLL
LKAFAETHSLALQQTMYEMGRAVIETHPEIDEIKMSLPNKHHFLVDLQPF
GQDNPNEVFYAADRPYGLIEATIQREGSRADHPIWSN
Ligand information
Ligand ID1AL
InChIInChI=1S/C4H8N4O4/c5-3(11)7-1(2(9)10)8-4(6)12/h1H,(H,9,10)(H3,5,7,11)(H3,6,8,12)/p-1
InChIKeyNUCLJNSWZCHRKL-UHFFFAOYSA-M
SMILES
SoftwareSMILES
ACDLabs 10.04O=C(NC(C([O-])=O)NC(=O)N)N
OpenEye OEToolkits 1.5.0C(C(=O)[O-])(NC(=O)N)NC(=O)N
CACTVS 3.341NC(=O)NC(NC(N)=O)C([O-])=O
FormulaC4 H7 N4 O4
NameALLANTOATE ION;
DIUREIDO-ACETATE
ChEMBL
DrugBankDB04380
ZINC
PDB chain2yzc Chain H Residue 305 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2yzc Trapping of the uric acid substrate in the crystal structure of urate oxidase from Arthrobacter globiformis
Resolution1.88 Å
Binding residue
(original residue number in PDB)		F163 R180 L222 N249
Binding residue
(residue number reindexed from 1)		F153 R170 L212 N239
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) K22 T67 R180 Q223 H251
Catalytic site (residue number reindexed from 1) K12 T57 R170 Q213 H241
Enzyme Commision number 1.7.3.3: factor independent urate hydroxylase.
Gene Ontology
Molecular Function
GO:0004846 urate oxidase activity
GO:0016491 oxidoreductase activity
Biological Process
GO:0006144 purine nucleobase metabolic process
GO:0019628 urate catabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:2yzc, PDBe:2yzc, PDBj:2yzc
PDBsum2yzc
PubMed
UniProtD0VWQ1|URIC_ARTGO Uricase (Gene Name=uox)

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