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BioLiP

Structure of PDB 1ud9 Chain C Binding Site BS02

Receptor Information
>1ud9 Chain C (length=239) Species: 111955 (Sulfurisphaera tokodaii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AHIVYDDVRDLKAIIQALLKLVDEALFDIKPEGIQLVAIDKAHISLIKIE
LPKEMFKEYDVPEEFKFGFNTQYMSKLLKAAKRKEEIIIDADSPEVVKLT
LSGALNRVFNVNNIEVLPPLEFDIKATINASGLKNAIGEIAEVADTLLIS
GNEEKVVVKGEGENKVEVEFSKDTGSLADIEFNKESSSAYDVEYLNDIIS
LTKLSDYVKVAFADQKPMQLEFNMEGGGKVTYLLAPKLS
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain1ud9 Chain C Residue 511 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1ud9 Crystal Structure of Proliferating Cell Nuclear Antigen (PCNA) Homolog From Sulfolobus tokodaii
Resolution1.68 Å
Binding residue
(original residue number in PDB)		E167 S245
Binding residue
(residue number reindexed from 1)		E161 S239
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030337 DNA polymerase processivity factor activity
Biological Process
GO:0006260 DNA replication
GO:0006272 leading strand elongation
GO:0006275 regulation of DNA replication

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Molecular Function
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Biological Process
External links
PDB RCSB:1ud9, PDBe:1ud9, PDBj:1ud9
PDBsum1ud9
PubMed
UniProtQ975N2|PCNA1_SULTO DNA polymerase sliding clamp 1 (Gene Name=pcn1)

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