Structure of PDB 1lvm Chain A Binding Site BS02
Receptor Information
>1lvm Chain A (length=229) Species:
12227
(Tobacco etch virus) [
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GHHHHHHHGESLFKGPRDYNPISSTICHLTNESDGHTTSLYGIGFGPFII
TNKHLFRRNNGTLLVQSLHGVFKVKNTTTLQQHLIDGRDMIIIRMPKDFP
PFPQKLKFREPQREERICLVTTNFQTKSMSSMVSDTSCTFPSSDGIFWKH
WIQTKDGQCGSPLVSTRDGFIVGIHSASNFTNTNNYFTSVPKNFMELLTN
QEAQQWVSGWRLNADSVLWGGHKVFMDKP
Ligand information
>1lvm Chain E (length=7) Species:
12227
(Tobacco etch virus) [
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EATQLMN
Receptor-Ligand Complex Structure
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PDB
1lvm
Structural basis for the substrate specificity of tobacco etch virus protease.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
V63 F64 K65 K67 D90
Binding residue
(residue number reindexed from 1)
V71 F72 K73 K75 D98
Enzymatic activity
Enzyme Commision number
2.7.7.48
: RNA-directed RNA polymerase.
3.4.-.-
3.4.22.44
: nuclear-inclusion-a endopeptidase.
3.4.22.45
: helper-component proteinase.
3.6.4.-
Gene Ontology
Molecular Function
GO:0008234
cysteine-type peptidase activity
Biological Process
GO:0006508
proteolysis
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Molecular Function
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Biological Process
External links
PDB
RCSB:1lvm
,
PDBe:1lvm
,
PDBj:1lvm
PDBsum
1lvm
PubMed
12377789
UniProt
P04517
|POLG_TEV Genome polyprotein
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