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BioLiP

Structure of PDB 6tyi Chain Y Binding Site BS01

Receptor Information
>6tyi Chain Y (length=31) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NGEMHDINVTPFIDVMLVLLIIFMVAAPLAT
Ligand information
>6tyi Chain Z (length=29) Species: 83333 (Escherichia coli K-12) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
NGEMHDINVTPFIDVMLVLLIIFMVAAPL
Receptor-Ligand Complex Structure
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PDB6tyi Cryo-EM structure of the bacterial Ton motor subcomplex ExbB-ExbD provides information on structure and stoichiometry.
Resolution3.3 Å
Binding residue
(original residue number in PDB)		I24 M27 L28 L31 F34 M35 A38
Binding residue
(residue number reindexed from 1)		I13 M16 L17 L20 F23 M24 A27
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0022857 transmembrane transporter activity
GO:0031992 energy transducer activity
GO:0042802 identical protein binding
GO:0042803 protein homodimerization activity
Biological Process
GO:0006879 intracellular iron ion homeostasis
GO:0015031 protein transport
GO:0015889 cobalamin transport
GO:0030003 intracellular monoatomic cation homeostasis
GO:0043213 bacteriocin transport
GO:0050821 protein stabilization
GO:0055085 transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0009279 cell outer membrane
GO:0016020 membrane
GO:0098797 plasma membrane protein complex
GO:1902495 transmembrane transporter complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6tyi, PDBe:6tyi, PDBj:6tyi
PDBsum6tyi
PubMed31602407
UniProtP0ABV2|EXBD_ECOLI Biopolymer transport protein ExbD (Gene Name=exbD)

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