Structure of PDB 8k42 Chain W Binding Site BS01

Receptor Information

>8k42 Chain W (length=612) Species: 77763 (Banna virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

NSIISLTGNDRTVADGTFNSMIMPRAVIANEREHFMKTRIDKIEHDLNRS
AKQEMMDRQSLAEDYNALNLAVGQEIKLDIATQHQLNRLGSAMYKADHER
ETELTDLINRIRENEVTVNGILENQKAITAAERADLLLEVVASTAKSVSA
AGRAAADGSGVVPVFGPSVANGIKVGIDIADSVAEAAIAVKESGIITQLN
DVYHAFQSVHVAPNDVIKPAAVVAGTSTELIGNLQAIYSRLRSHSDIGFK
KATVGDVIPNSYMIKPVNSTEYASWQLYVIHPVQGSLGLVVQLMGDALTY
NVFAQYGNTSASEFGKTVLTGGATNTALEGTKVKFQTKVTAQQALALTMA
LKDAASMLSQGELIGYFEQYINLALEPDNLSLQDNMHKYHHLLTSQNSPI
DWNYHDEEMHKWLDSRKTTNYDAMQKKDGTVIADIHIPKVFNDLRNTTLH
CKLEGKQTIAGYTVYEYLIGPWAHYGDIDYSVVVDTLNEETKWYCEVIGI
DGHLLIEKSVQHKPEKILELTVNDSGVTSFNGRNHDRLKLKVYVKDSLSV
KVFRNWIGINAPRVKTKMFNDHIGVKYDYSHFDKNISPAHLTLTDLGWHT
WDQYNAGNWTNI

Ligand information

>8k42 Chain w (length=14) Species: 77763 (Banna virus) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

LSETELRALKKLST

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	8k42 Cryo-EM structures of Banna virus in multiple states reveal stepwise detachment of viral spikes.
Resolution	2.64 Å
Binding residue (original residue number in PDB)	M70 D71 S74 D78 D499 N502 Q525 H526 L562 S563 K565
Binding residue (residue number reindexed from 1)	M56 D57 S60 D64 D485 N488 Q511 H512 L548 S549 K551

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:8k42, PDBe:8k42, PDBj:8k42
PDBsum	8k42
PubMed	38480794
UniProt	B4Y048

[Back to BioLiP]

zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417