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BioLiP

Structure of PDB 8hev Chain L Binding Site BS01

Receptor Information
>8hev Chain L (length=417) Species: 10359 (Human betaherpesvirus 5) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DEAVIDIFPTGQTMSFLRLLHGFLGTCRGQSMHQVLRDPCVLRKQLLYGV
CKTLFDTITVRRVAEEWKLHAALFPYRALDEEDLEQYLLVWSASLRQSVQ
TGVLGALRDILYQYADNDDYGLYVDWCVTVGLVPLLDVKTKPSEAAERAQ
FVRAAVQRATETHPLAQDLLQANLALLLQVAERLGAVRVANAPEVRVFKK
VRSERLEAQLRGKHIRLYVAAEPLAYERDKLLFTTPVAHLHEEILRYDGL
CRHQKICQLLNTFPVKVVTDAELYHLPVLEAVRKARDAAPFRPLAVEDNR
LVANSFFSQFVPGTESLERFLTQLWENEYFRTFRLRRLVTHQGAEEAIVY
SNYTVERVTLPYLCHILALGTLDPVPEAYLQLSFGEIVAAAYDDSKFCRY
VELICSREKARRRQMSR
Ligand information
>8hev Chain S (length=15) Species: 10359 (Human betaherpesvirus 5) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
AAAAAAAAAAAAAAA
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8hev Cryo-electron microscopy structures of capsids and in situ portals of DNA-devoid capsids of human cytomegalovirus.
Resolution4.2 Å
Binding residue
(original residue number in PDB)		H121 F125 Y127 W142 S145 L146
Binding residue
(residue number reindexed from 1)		H70 F74 Y76 W91 S94 L95
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0051276 chromosome organization
Cellular Component
GO:0042025 host cell nucleus
GO:0044423 virion component

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Biological Process
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Cellular Component
External links
PDB RCSB:8hev, PDBe:8hev, PDBj:8hev
PDBsum8hev
PubMed37041152
UniProtP16735|PORTL_HCMVA Portal protein (Gene Name=UL104)

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