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BioLiP

Structure of PDB 9ash Chain J Binding Site BS01

Receptor Information
>9ash Chain J (length=311) Species: 1360 (Lactococcus lactis subsp. lactis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKKTYRVTLTALGPIFIGGGEKLKKYEYIFDKQKKVAHMIDHTKFTKYLL
EKNLLDDFTSRVNSHFDLYDYLVNKKGIVFMPLVKYSVPVAQFSPPMNDL
NTFVKDAFGRPYIPGSSLKGALRTAILNDLKEDTKENEVFAHLQVSDSET
IDLENLKVYQKVDYSKTAKPLPLYRECLKPNTEITFTVSFDDEYLTLKKI
QNALHKTYQHYYIKWLKGGKVGETLIKGVFALDQPSQNQGEIIYIGGGAG
FVSKTLHYKSKNRDQARNDSFDILKQLFRTTYSKMRSVPDNVPTGKHYLE
MGKARIKLEEL
Ligand information
>9ash Chain R (length=37) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acgagaacgcagcaccagcuguccaaccugaagaaga
.....................................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9ash Molecular basis for cA6 synthesis by a type III-A CRISPR-Cas enzyme and its conversion to cA4 production.
Resolution2.58 Å
Binding residue
(original residue number in PDB)		F16 I17 G18 S129 K132 R136 K148 F153 A154 K174 D176 Y269 I270 G272 G273 G275 F276 S278 K279 L299 F303 T305 Y307 S308 K309 R311
Binding residue
(residue number reindexed from 1)		F16 I17 G18 S116 K119 R123 K135 F140 A141 K161 D163 Y244 I245 G247 G248 G250 F251 S253 K254 L274 F278 T280 Y282 S283 K284 R286
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