Structure of PDB 1c5c Chain H Binding Site BS01
Receptor Information
>1c5c Chain H (length=215) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
QVQLLEPGTELVKPGASVKLSCRASGYSFTSYWMHWVKQRPGQGLEWIGL
IDPSNGRTNFNDKFKSRATLTVDTSSSTAYMQLSSLTSEDSAVYYCVRIA
YWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT
VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHK
PSNTKVDKKVEPKSC
Ligand information
Ligand ID
TK4
InChI
InChI=1S/C12H11NO7S2/c1-7(14)13-10-6-5-8-9(12(10)22(18,19)20)3-2-4-11(8)21(15,16)17/h2-6H,1H3,(H,13,14)(H,15,16,17)(H,18,19,20)
InChIKey
WGOQGHNONXFNJQ-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
CC(=O)Nc1ccc2c(c1S(=O)(=O)O)cccc2S(=O)(=O)O
CACTVS 3.341
CC(=O)Nc1ccc2c(cccc2[S](O)(=O)=O)c1[S](O)(=O)=O
ACDLabs 10.04
O=S(=O)(O)c1cccc2c1ccc(NC(=O)C)c2S(=O)(=O)O
Formula
C12 H11 N O7 S2
Name
2-ACETYLAMINO-NAPTHALENE-1,5-DISULFONIC ACID
ChEMBL
DrugBank
ZINC
PDB chain
1c5c Chain L Residue 1001 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1c5c
Catalysis of decarboxylation by a preorganized heterogeneous microenvironment: crystal structures of abzyme 21D8.
Resolution
1.61 Å
Binding residue
(original residue number in PDB)
H35 I95 A101
Binding residue
(residue number reindexed from 1)
H35 I99 A100
Annotation score
1
Binding affinity
PDBbind-CN
: -logKd/Ki=6.96,Kd=110nM
External links
PDB
RCSB:1c5c
,
PDBe:1c5c
,
PDBj:1c5c
PDBsum
1c5c
PubMed
11183784
[
Back to BioLiP
]