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BioLiP

Structure of PDB 8rbm Chain E Binding Site BS01

Receptor Information
>8rbm Chain E (length=211) Species: 322710 (Azotobacter vinelandii DJ) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PWQYFTSALWQYNVALVQMLALCPTLAVTTTATNGLGMGLATTLVLVMTN
ALISSMRHTISPEVRNPVMIGVIAGVVTLTDMAMNAWMHELYKVLGLFIA
LIVTNCAVLGRAESFCLRNPVIPSILDGAGMGAGFTAVLVVIGGIREILG
SGTLFSQASSLLGSHFKWMEITVIPDFQGILLAILPPGAFIVLGFLLAAK
RVIDRKRAERR
Ligand information
Ligand IDFES
InChIInChI=1S/2Fe.2S
InChIKeyNIXDOXVAJZFRNF-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04[Fe]1S[Fe]S1
CACTVS 3.341
OpenEye OEToolkits 1.5.0		S1[Fe]S[Fe]1
FormulaFe2 S2
NameFE2/S2 (INORGANIC) CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain8rbm Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8rbm Architecture of the RNF1 complex that drives biological nitrogen fixation.
Resolution3.24 Å
Binding residue
(original residue number in PDB)		C39 C122
Binding residue
(residue number reindexed from 1)		C23 C106
Annotation score4
Gene Ontology
Biological Process
GO:0022900 electron transport chain
Cellular Component
GO:0005886 plasma membrane

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Biological Process
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Cellular Component
External links
PDB RCSB:8rbm, PDBe:8rbm, PDBj:8rbm
PDBsum8rbm
PubMed38890433
UniProtQ9F5Y1|RNFE_AZOVD Ion-translocating oxidoreductase complex subunit E (Gene Name=rnfE)

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