Structure of PDB 3tby Chain D Binding Site BS01

Receptor Information
>3tby Chain D (length=266) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPREVTLRC
WALGFYPADITLTWQGEEMELVETRPAGDGTFQKWASVVVPLGKEQNYTC
RVYHEGLPEPLTLRWE
Ligand information
>3tby Chain F (length=9) Species: 11627 (Lymphocytic choriomeningitis virus (strain WE)) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
KAPFNFATM
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3tby Conversion of a T cell viral antagonist into an agonist through higher stabilization and conserved molecular mimicry: Implications for TCR recognition
Resolution2.5 Å
Binding residue
(original residue number in PDB)		Y7 E63 K66 Q70 W73 S77 Y84 Q97 S99 F116 T143 K146 W147 H155 Y156 Y159 E163 W167 Y171
Binding residue
(residue number reindexed from 1)		Y7 E63 K66 Q70 W73 S77 Y84 Q97 S99 F116 T143 K146 W147 H155 Y156 Y159 E163 W167 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:3tby, PDBe:3tby, PDBj:3tby
PDBsum3tby
PubMed
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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