Structure of PDB 1fz8 Chain D Binding Site BS01

Receptor Information
>1fz8 Chain D (length=388) Species: 414 (Methylococcus capsulatus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SMLGERRRGLTDPEMAAVILKALPEAPLDGNNKMGYFVTPRWKRLTEYEA
LTVYAQPNADWIAGGLDWGDWTQKFHGGRPSWGNETTELRTVDWFKHRDP
LRRWHAPYVKDKAEEWRYTDRFLQGYSADGQIRAMNPTWRDEFINRYWGA
FLFNEYGLFNAHSQGAREALSDVTRVSLAFWGFDKIDIAQMIQLERGFLA
KIVPGFDESTAVPKAEWTNGEVYKSARLAVEGLWQEVFDWNESAFSVHAV
YDALFGQFVRREFFQRLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYYN
CLGDDPEFSDYNRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEE
ITASLYRVVDDWIEDYASRIDFKADRDQIVKAVLAGLK
Ligand information
Ligand ID2BM
InChIInChI=1S/CH2Br2/c2-1-3/h1H2
InChIKeyFJBFPHVGVWTDIP-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(Br)Br
ACDLabs 10.04
CACTVS 3.341		BrCBr
FormulaC H2 Br2
NameDIBROMOMETHANE
ChEMBLCHEMBL1229889
DrugBank
ZINC
PDB chain1fz8 Chain C Residue 9005 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1fz8 Xenon and halogenated alkanes track putative substrate binding cavities in the soluble methane monooxygenase hydroxylase.
Resolution2.1 Å
Binding residue
(original residue number in PDB)		Y119 F123
Binding residue
(residue number reindexed from 1)		Y118 F122
Annotation score1
Enzymatic activity
Enzyme Commision number 1.14.13.25: methane monooxygenase (soluble).
Gene Ontology
Molecular Function
GO:0004497 monooxygenase activity
GO:0005515 protein binding
GO:0015049 methane monooxygenase [NAD(P)H] activity
GO:0016491 oxidoreductase activity
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
Biological Process
GO:0006730 one-carbon metabolic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1fz8, PDBe:1fz8, PDBj:1fz8
PDBsum1fz8
PubMed11297413
UniProtP18798|MEMB_METCA Methane monooxygenase component A beta chain (Gene Name=mmoY)

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