Structure of PDB 1ffo Chain D Binding Site BS01
Receptor Information
>1ffo Chain D (length=273) Species:
10090
(Mus musculus) [
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PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPW
MEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGC
DLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSG
AAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTL
RCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPL
GKEQNYTCRVYHEGLPEPLTLRW
Ligand information
>1ffo Chain F (length=9) [
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AAVYNFATM
Receptor-Ligand Complex Structure
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PDB
1ffo
Peptidic termini play a significant role in TCR recognition.
Resolution
2.65 Å
Binding residue
(original residue number in PDB)
Y7 E63 K66 Q70 W73 S77 N80 Y84 Q97 S99 F116 Y123 T143 K146 W147 H155 Y156 Y159 E163 W167 Y171
Binding residue
(residue number reindexed from 1)
Y6 E62 K65 Q69 W72 S76 N79 Y83 Q96 S98 F115 Y122 T142 K145 W146 H154 Y155 Y158 E162 W166 Y170
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:1ffo
,
PDBe:1ffo
,
PDBj:1ffo
PDBsum
1ffo
PubMed
12218131
UniProt
P01899
|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)
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