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BioLiP

Structure of PDB 1wbi Chain C Binding Site BS01

Receptor Information
>1wbi Chain C (length=121) Species: 9031 (Gallus gallus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ARKCSLTGEWDNDLGSIMTIGAVNDNGEFDGTYITAVADNPGNITLSPLL
GIQHKRASQPTFGFTVHWNFSESTSVFVGQCFVDRSGKEVLKTKWLQRLA
VDDISDDWIATRVGNNDFTRQ
Ligand information
Ligand IDBTN
InChIInChI=1S/C10H16N2O3S/c13-8(14)4-2-1-3-7-9-6(5-16-7)11-10(15)12-9/h6-7,9H,1-5H2,(H,13,14)(H2,11,12,15)/t6-,7-,9-/m0/s1
InChIKeyYBJHBAHKTGYVGT-ZKWXMUAHSA-N
SMILES
SoftwareSMILES
CACTVS 3.385OC(=O)CCCC[CH]1SC[CH]2NC(=O)N[CH]12
CACTVS 3.385OC(=O)CCCC[C@@H]1SC[C@@H]2NC(=O)N[C@H]12
ACDLabs 12.01O=C1NC2C(SCC2N1)CCCCC(=O)O
OpenEye OEToolkits 1.7.6C1C2C(C(S1)CCCCC(=O)O)NC(=O)N2
OpenEye OEToolkits 1.7.6C1[C@H]2[C@@H]([C@@H](S1)CCCCC(=O)O)NC(=O)N2
FormulaC10 H16 N2 O3 S
NameBIOTIN
ChEMBLCHEMBL857
DrugBankDB00121
ZINCZINC000035024346
PDB chain1wbi Chain C Residue 1001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1wbi Avidin Related Protein 2 Shows Unique Structural and Functional Features Among the Avidin Protein Family.
Resolution1.4 Å
Binding residue
(original residue number in PDB)		S16 Y33 T35 V37 A38 D39 W68 F70 S71 S75 F77 W95 Q97
Binding residue
(residue number reindexed from 1)		S16 Y33 T35 V37 A38 D39 W68 F70 S71 S75 F77 W95 Q97
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0015878 biotin transport
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Cellular Component
External links
PDB RCSB:1wbi, PDBe:1wbi, PDBj:1wbi
PDBsum1wbi
PubMed16212654
UniProtP56732|AVR2_CHICK Avidin-related protein 2 (Gene Name=AVR2)

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