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BioLiP

Structure of PDB 6s1v Chain B Binding Site BS01

Receptor Information
>6s1v Chain B (length=105) Species: 11855 (Mason-Pfizer monkey virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
WVQPITCQKPSLTLWLDDKMFTGLINTGADVTIIKLEDWPPNWPITDTLT
NLRQSNNPKQSSKYLTWRDKENNSGLIKPFVIPNLPVNLWGRDLLSQMKI
MMCSP
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6s1v Comparison of a retroviral protease in monomeric and dimeric states.
Resolution1.64 Å
Binding residue
(original residue number in PDB)		N26 G28 D30 I33 L52 P89 L92
Binding residue
(residue number reindexed from 1)		N26 G28 D30 I33 L52 P86 L89
Enzymatic activity
Enzyme Commision number 2.7.7.-
2.7.7.49: RNA-directed DNA polymerase.
2.7.7.7: DNA-directed DNA polymerase.
3.1.-.-
3.1.26.4: ribonuclease H.
3.4.23.-
3.6.1.23: dUTP diphosphatase.
Gene Ontology
Molecular Function
GO:0004190 aspartic-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:6s1v, PDBe:6s1v, PDBj:6s1v
PDBsum6s1v
PubMed31588922
UniProtP07572|POL_MPMV Gag-Pro-Pol polyprotein (Gene Name=gag-pro-pol)

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