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BioLiP

Structure of PDB 6m1y Chain B Binding Site BS01

Receptor Information
>6m1y Chain B (length=938) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NRMANYTNLTQGAKEHEEAENQMGTFMGVYLPCLQNIFGVILFLRLTWVV
GTAGVLQAFAIVLICCCCTMLTAISMSAIATNGVVPAGGSYFMISRALGP
EFGGAVGLCFYLGTTFAAAMYILGAIEIFLVYIVPRAAIFHSDDALKESA
AMLNNMRVYGTAFLVLMVLVVFIGVRYVNKFASLFLACVIVSILAIYAGA
IKSSFAPPHFPVCMLGNRTLSSRHIDVCSKTKEINNMTVPSKLWGFFCNS
SQFFNATCDEYFVHNNVTSIQGIPGLASGIITENLWSNYLPKGEIIEKPS
AKSSDVLGSLNHEYVLVDITTSFTLLVGIFFPSVTGIMAGSNRSGDLKDA
QKSIPIGTILAILTTSFVYLSNVVLFGACIEGVVLRDKFGDAVKGNLVVG
TLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGH
SKANGEPTWALLLTAAIAELGILIASLDLVAPILSMFFLMCYLFVNLACA
LQTLLRTPNWRPRFRYYHWALSFMGMSICLALMFISSWYYAIVAMVIAGM
IYKYIEYQGAEKEWGDGIRGLSLSAARFALLRLEEGPPHTKNWRPQLLVL
LKLDEDLHVKHPRLLTFASQLKAGKGLTIVGSVIVGNFLENYGEALAAEQ
TIKHLMEAEKVKGFCQLVVAAKLREGISHLIQSCGLGGMKHNTVVMGWPN
GWRQSEDARAWKTFIGTVRVTTAAHLALLVAKNISFFPSNVEQFSEGNID
VWWIVHDGGMLMLLPFLLKQHKVWRKCSIRIFTVAQLEDNSIQMKKDLAT
FLYHLRIEAEVEVVEMHDSDISAYTYERTLMMEQRSQMLRHMRLSKTERD
REAQLVKDRNSVHMTWTKVRRMHTAVKLNEVIVNKSHEAKLVLLNMPGPP
RNPEGDENYMEFLEVLTEGLERVLLVRGGGSEVITIYS
Ligand information
Ligand IDCL
InChIInChI=1S/ClH/h1H/p-1
InChIKeyVEXZGXHMUGYJMC-UHFFFAOYSA-M
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[Cl-]
FormulaCl
NameCHLORIDE ION
ChEMBL
DrugBankDB14547
ZINC
PDB chain6m1y Chain B Residue 1102 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6m1y Cryo-EM structures of the full-length human KCC2 and KCC3 cation-chloride cotransporters.
Resolution3.2 Å
Binding residue
(original residue number in PDB)		G447 M449 Y603
Binding residue
(residue number reindexed from 1)		G336 M338 Y492
Annotation score5
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0015293 symporter activity
GO:0015377 chloride:monoatomic cation symporter activity
GO:0015379 potassium:chloride symporter activity
GO:0019901 protein kinase binding
GO:0022857 transmembrane transporter activity
GO:0046872 metal ion binding
Biological Process
GO:0001525 angiogenesis
GO:0006811 monoatomic ion transport
GO:0006813 potassium ion transport
GO:0006884 cell volume homeostasis
GO:0007268 chemical synaptic transmission
GO:0055064 chloride ion homeostasis
GO:0055075 potassium ion homeostasis
GO:0055085 transmembrane transport
GO:0071333 cellular response to glucose stimulus
GO:0071477 cellular hypotonic salinity response
GO:0071805 potassium ion transmembrane transport
GO:1902476 chloride transmembrane transport
GO:1990573 potassium ion import across plasma membrane
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016323 basolateral plasma membrane
GO:0030424 axon
GO:0045202 synapse

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6m1y, PDBe:6m1y, PDBj:6m1y
PDBsum6m1y
PubMed33199848
UniProtQ9UHW9|S12A6_HUMAN Solute carrier family 12 member 6 (Gene Name=SLC12A6)

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