BioLiP
Structure of PDB 4v87 Chain AH Binding Site BS01
>4v87 Chain AA (length=2912)
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ggucaagaugguaagggcccacgguggaugccucggcacccgagccgaug aaggacguggcuaccugcgauaagccagggggagccgguagcgggcgugg aucccuggauguccgaaugggggaacccggccggcgggaacgccggucac cgcgcuuuuugcgcggggggaaccuggggaacugaaacaucucaguaccc agaggagaggaaagagaaaucgacucccugaguagcggcgagcgaaaggg gaccagccuaaaccguccggcuuguccgggcggggucguggggcccucgg acaccgaauccccagccuagccgaagcuguugggaagcagcgccagagag ggugaaagccccguaggcgaaagguggggggauaggugaggguacccgag uaccccgugguucguggagccaugggggaaucugggcggaccaccgccua aggcuaaguacuccgggugaccgauagcgcaccaguaccgugagggaaag gugaaaagaaccccgggaggggagugaaauagagccugaaaccgugggcu uacaagcagucacggccccgcaagggguuguggcgugccuauugaagcau gagccggcgacucacggucgugggcgagcuuaagccguugaggcggaggc guagggaaaccgaguccgaacagggcgcaaacggcccgcacgcgggccga aaaguccgcggccguggacccgaaaccgggcgagcuagcccuggccaggg ugaagcuggggugagacccaguggaggcccgaaccggugggggaugcaaa ccccucggaugagcuggggcuaggagugaaaagcuaaccgagcccggaga uagcugguucuccccgaaaugacuuuagggucagccucaggcgcugacug gggccuguagagcacugauagggcuagggggcccaccagccuaccaaacc cugucaaacuccgaagggucccagguggagccugggagugagggcgcgag cgauaacguccgcguccgagcgcgggaacaaccgagaccgccagcuaagg cccccaagucugggcuaagugguaaaggauguggcgccgcgaagacagcc aggauguuggcuuagaagcagccaucauuuaaagagugcguaauagcuca cuggucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagcgcc gaagcugcgggucugggggaugaccccaggcgguaggggagcguucccga ugccgaugaaggccgacccgcgagggcggcuggagguaagggaagugcga augccggcaugaguaacgauaaagagggugagaaucccucucgccguaag cccaaggguuccuacgcaauggucgucagcguaggguuaggcgggaccua aggugaagccgaaaggcguagccgaagggcagccgguuaauauuccggcc cuucccgcaggugcgauggggggacgcucuaggcuagggggaccggagcc auggacgagcccggccagaagcgcagggugggagguaggcaaauccgccu cccaacaagcucugcgugguggggaagcccguacgggugacaaccccccg aagccagggagccaagaaaagccucuaagcacaaccugcgggaacccgua ccgcaaaccgacacaggugggcgggugcaagagcacucaggcgcgcggga gaacccucgccaaggaacucugcaaguuggccccguaacuucgggagaag gggugcucccuggggugaugagccccggggagccgcagugaacaggcucu ggcgacuguuuaccaaaaacacagcucucugcgaacucguaagaggaggu auagggagcgacgcuugcccggugccggaaggucaaggggaggggugcaa gccccgaaccgaagccccggugaacggcggccguaacuauaacgguccua agguagcgaaauuccuugucggguaaguuccgaccugcacgaaaagcgua acgaccggagcgcugucucggcgagggacccggugaaauugaacuggccg ugaagaugcggccuacccguggcaggacgaaaagaccccguggagcuuua cugcagccugguguuggcucuuggucgcgccugcguaggauaggugggag ccugugaacccccgccuccgggugggggggaggcgccggugaaauaccac ccuggcgcggcugggggccuaacccucggauggggggacagcgcuuggcg ggcaguuugacuggggcggucgccuccuaaaagguaacggaggcgcccaa agguccccucaggcgggacggaaauccgccggagagcgcaaggguagaag ggggccugacugcgaggccugcaagccgagcaggggcgaaagccgggccu agugaaccgguggucccguguggaagggccaucgaucaacggauaaaagu uaccccggggauaacaggcugaucucccccgagcguccacagcggcgggg agguuuggcaccucgaugucggcucgucgcauccuggggcugaagaaggu cccaaggguugggcuguucgcccauuaaagcggcacgcgagcuggguuca gaacgucgugagacaguucggucucuauccgccacgggcgcaggaggcuu gaggggggcucuuccuaguacgagaggaccggaagggacgcaccucuggu uucccagcugucccuccaggggcauaagcuggguagccaugugcggaagg gauaaccgcugaaagcaucuaagcgggaagcccgccccaagaugaggccu cccacggcgucaagccgguaaggacccgggaagaccacccgguggauggg ccggggguguaagcgccgcgaggcguugagccgaccggucccaaucgucc gaggucuugacc
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UnboundLocalError Python 3.6.8: /usr/bin/python3 Fri May 16 23:28:38 2025
A problem occurred in a Python script. Here is the sequence of
function calls leading up to the error, in the order they occurred.
/var/www/html/BioLiP/pdb.cgi in <module> ()
1701 title=pdb2title(pdbid)
1702 if bs.startswith("BS"):
=> 1703 pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
1704 else:
1705 if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '4v87', asym_id = 'AH', bs = 'BS01', title = 'A new understanding of the decoding principle on the ribosome.'
/var/www/html/BioLiP/pdb.cgi in display_interaction (pdbid='4v87', asym_id='AH', bs='BS01', title='A new understanding of the decoding principle on the ribosome.')
1326 display_ec(ec,csaOrig,csaRenu)
1327 if go:
=> 1328 display_go(go,uniprot,pdbid,asym_id)
1329 return pubmed,uniprot
1330
global display_go = <function display_go>, go = '0003735,0005840,0006412,0019843', uniprot = '', pdbid = '4v87', asym_id = 'AH'
/var/www/html/BioLiP/pdb.cgi in display_go (go='0003735,0005840,0006412,0019843', uniprot='', pdbid='4v87', asym_id='AH')
484 '''.replace("$namespace_link",namespace_link
485 ).replace("$namespace",namespace
=> 486 ).replace("$uniprot",u
487 ))
488 for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined
UnboundLocalError : local variable 'u' referenced before assignment
args =
("local variable 'u' referenced before assignment",)
with_traceback =
<built-in method with_traceback of UnboundLocalError object>