Structure of PDB 8v1q Chain A Binding Site BS01

Receptor Information
>8v1q Chain A (length=1097) Species: 10306 (Human alphaherpesvirus 1 strain KOS) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GPTQRHTYYSECDEFRFIAPRVLDEDAPPEKRAGVHDGHLKRAPKVYCGG
DERDVLRVGSGGFWPRRSRLWGGVDHAPAGFNPTVTVFHVYDILENVEHA
YGMRAAQFHARFMDAITPTGTVITLLGLTPEGHRVAVHVYGTRQYFYMNK
EEVDRHLQCRAPRDLCERMAAALRESPGASFRGISADHFEAEVVERTDVY
YYETRPALFYRVYVRSGRVLSYLCDNFCPAIKKYEGGVDATTRFILDNPG
FVTFGWYRLKPGRNNTLAQPRAPMAFGTSSDVEFNCTADNLAIEGGMSDL
PAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQISCLLYDLSTTALEHV
LLFSLGSCDLPESHLNELAARGLPTPVVLEFDSEFEMLLAFMTLVKQYGP
EFVTGYNIINFDWPFLLAKLTDIYKVPLDGYGRMNGRGVFRVWDIGQSHF
QKRSKIKVNGMVNIDMYGIITDKIKLSSYKLNAVAEAVLKDKKKDLSYRD
IPAYYATGPAQRGVIGEYCIQDSLLVGQLFFKFLPHLELSAVARLAGINI
TRTIYDGQQIRVFTCLLRLADQKGFILPDTQGRFRGAGRHVGYQGARVLD
PTSGFHVNPVVVFDFASLYPSIIQAHNLCFSTLSLRADAVAHLEAGKDYL
EIEVGGRRLFFVKAHVRESLLSILLRDWLAMRKQIRSRIPQSSPEEAVLL
DKQQAAIKVVCNSVYGFTGVQHGLLPCLHVAATVTTIGREMLLATREYVH
ARWAAFEQLLADFPEAADMRAPGPYSMRIIYGDTDSIFVLCRGLTAAGLT
AMGDKMASHISRALFLPPIKLECEKTFTKLLLIAKKKYIGVIYGGKMLIK
GVDLVRKNNCAFINRTSRALVDLLFYDDTVSGAAAALAERPAEEWLARPL
PEGLQAFGAVLVDAHRRITDPERDIQDFVLTAELSRHPRAYTNKRLAHLT
VYYKLMARRAQVPSIKDRIPYVIVAQTREVEETVARLAALRELDAPRKLL
VSELAEDPAYAIAHGVALNTDYYFSHLLGAACVTFKALFGNNAKITESLL
KRFIPEVWHPPDDVAARLRAAGFGAVGAGATAEETRRMLHRAFDTLA
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8v1q Viral DNA polymerase structures reveal mechanisms of antiviral drug resistance.
Resolution2.7 Å
Binding residue
(original residue number in PDB)
K534 R692 D886 T887 D888 K939 Y941 K953 G954 R959 K960 E1036 S1038 R1039 Y1044 T1045 N1046 H1051 R1071
Binding residue
(residue number reindexed from 1)
K475 R589 D783 T784 D785 K836 Y838 K850 G851 R856 K857 E933 S935 R936 Y941 T942 N943 H948 R968
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