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BioLiP

Structure of PDB 7fgz Chain A Binding Site BS01

Receptor Information
>7fgz Chain A (length=260) Species: 1872586 (Aquimarina sp.) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QEKYKDVLLPKELTQIGDWKVDKNLSDDFNYTTKNKKFFKKWKDSYTNDW
TGPGLSHFSSNHSILKDGNLEIKAERKPPNKVYCGVISSRKEVIYPAYME
IKMKISGLKLSSNFWFISKDQVLEIDVNETYGNEPDRSKKMGTNYHIFQR
TPFKDLTPNNGKHYTAKGAPFLKDQFHRFGCHWKDAYHADFYLDGTLVRQ
LTIEDPRTSGVGFNQGLLMVIDTEDHDWRSKKGITPTDDELLDETINTMY
VDWVRVYKPK
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain7fgz Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7fgz Marine bacterial GH16 hydrolase
Resolution2.2 Å
Binding residue
(original residue number in PDB)		D47 N49 G87 D271
Binding residue
(residue number reindexed from 1)		D28 N30 G68 D252
Annotation score4
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Tue May 13 05:22:39 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1701     title=pdb2title(pdbid)
   1702     if bs.startswith("BS"):
=> 1703         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1704     else:
   1705         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7fgz', asym_id = 'A', bs = 'BS01', title = 'Marine bacterial GH16 hydrolase'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7fgz', asym_id='A', bs='BS01', title='Marine bacterial GH16 hydrolase')
   1326         display_ec(ec,csaOrig,csaRenu)
   1327     if go:
=> 1328         display_go(go,uniprot,pdbid,asym_id)
   1329     return pubmed,uniprot
   1330 
global display_go = <function display_go>, go = '0004553,0005975,0033916', uniprot = '', pdbid = '7fgz', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004553,0005975,0033916', uniprot='', pdbid='7fgz', asym_id='A')
    484         '''.replace("$namespace_link",namespace_link
    485           ).replace("$namespace",namespace
=>  486           ).replace("$uniprot",u
    487         ))
    488         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>