Structure of PDB 6fx1 Chain A Binding Site BS01

Receptor Information
>6fx1 Chain A (length=40) Species: 75321 (Pholiota squarrosa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
APVPVTKLVCDGDTYKCTAYLDFGDGRWVAQWDTNVFHTG
Ligand information
Ligand IDFUC
InChIInChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3+,4+,5-,6+/m0/s1
InChIKeySHZGCJCMOBCMKK-SXUWKVJYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341C[C@@H]1O[C@@H](O)[C@@H](O)[C@H](O)[C@@H]1O
ACDLabs 10.04OC1C(O)C(OC(O)C1O)C
OpenEye OEToolkits 1.5.0CC1C(C(C(C(O1)O)O)O)O
OpenEye OEToolkits 1.5.0C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O)O)O)O
CACTVS 3.341C[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
FormulaC6 H12 O5
Namealpha-L-fucopyranose;
alpha-L-fucose;
6-deoxy-alpha-L-galactopyranose;
L-fucose;
fucose
ChEMBLCHEMBL1232862
DrugBankDB04473
ZINCZINC000001532814
PDB chain6fx1 Chain M Residue 6 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6fx1 Recognition of Complex Core-Fucosylated N-Glycans by a Mini Lectin.
Resolution2.1 Å
Binding residue
(original residue number in PDB)		G12 D13
Binding residue
(residue number reindexed from 1)		G12 D13
Annotation score4
Binding affinityPDBbind-CN: -logKd/Ki=3.98,Kd=105uM
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6fx1, PDBe:6fx1, PDBj:6fx1
PDBsum6fx1
PubMed29956878
UniProtA0A3B6UEU4

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