Structure of PDB 1gkt Chain A Binding Site BS01
Receptor Information
>1gkt Chain A (length=328) Species:
5116
(Cryphonectria parasitica) [
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STGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTA
SEVQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYTDTVSVGGLTVT
GQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKASL
DSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGY
AVGSGTFKSTSIDGIADTGTTLLYLPATVVSAYWAQVSGAKSSSSVGGYV
FPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGI
NIFGDVALKAAFVVFNGATTPTLGFASK
Ligand information
>1gkt Chain B (length=7) Species:
32630
(synthetic construct) [
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HPFHIIH
Receptor-Ligand Complex Structure
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PDB
1gkt
A Neutron Laue Diffraction Study of Endothiapepsin: Implications for the Aspartic Proteinase Mechanism
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
I10 L13 D15 D35 G37 S78 Y79 G80 D81 I122 D219 G221 T222 T223 G281 P282 I300 I304
Binding residue
(residue number reindexed from 1)
I10 L13 D15 D35 G37 S76 Y77 G78 D79 I120 D217 G219 T220 T221 G279 P280 I298 I302
Enzymatic activity
Catalytic site (original residue number in PDB)
D35 S38 D40 W42 G80 T220 T223
Catalytic site (residue number reindexed from 1)
D35 S38 D40 W42 G78 T218 T221
Enzyme Commision number
3.4.23.22
: endothiapepsin.
External links
PDB
RCSB:1gkt
,
PDBe:1gkt
,
PDBj:1gkt
PDBsum
1gkt
PubMed
11683623
UniProt
P11838
|CARP_CRYPA Endothiapepsin (Gene Name=EAPA)
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