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BioLiP
Download all results in tab-seperated text for 124 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7cjj:A (2.4) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 33953929
    2 7cjj:A (2.4) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 33953929
    3 7cjj:A (2.4) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 33953929
    4 7cjj:A (2.4) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 33953929
    5 7cjj:A (2.4) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 33953929
    6 7cjj:A (2.4) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 33953929
    7 7cjj:A (2.4) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 33953929
    8 7cjj:A (2.4) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 33953929
    9 7cjj:A (2.4) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 33953929
    10 7cjj:B (2.4) BS01 CLA ? GO:0009521 ... D0VWR1 33953929
    11 7cjj:B (2.4) BS02 CLA ? GO:0009521 ... D0VWR1 33953929
    12 7cjj:B (2.4) BS03 CLA ? GO:0009521 ... D0VWR1 33953929
    13 7cjj:B (2.4) BS04 CLA ? GO:0009521 ... D0VWR1 33953929
    14 7cjj:B (2.4) BS05 CLA ? GO:0009521 ... D0VWR1 33953929
    15 7cjj:B (2.4) BS06 CLA ? GO:0009521 ... D0VWR1 33953929
    16 7cjj:B (2.4) BS07 CLA ? GO:0009521 ... D0VWR1 33953929
    17 7cjj:B (2.4) BS08 CLA ? GO:0009521 ... D0VWR1 33953929
    18 7cjj:B (2.4) BS09 CLA ? GO:0009521 ... D0VWR1 33953929
    19 7cjj:B (2.4) BS10 CLA ? GO:0009521 ... D0VWR1 33953929
    20 7cjj:B (2.4) BS11 CLA ? GO:0009521 ... D0VWR1 33953929
    21 7cjj:B (2.4) BS12 CLA ? GO:0009521 ... D0VWR1 33953929
    22 7cjj:B (2.4) BS13 CLA ? GO:0009521 ... D0VWR1 33953929
    23 7cjj:B (2.4) BS14 CLA ? GO:0009521 ... D0VWR1 33953929
    24 7cjj:B (2.4) BS15 CLA ? GO:0009521 ... D0VWR1 33953929
    25 7cjj:B (2.4) BS16 CLA ? GO:0009521 ... D0VWR1 33953929
    26 7cjj:C (2.4) BS01 OEX ? GO:0005737 ... D0VWR7 33953929
    27 7cjj:C (2.4) BS02 CLA ? GO:0005737 ... D0VWR7 33953929
    28 7cjj:C (2.4) BS03 CLA ? GO:0005737 ... D0VWR7 33953929
    29 7cjj:C (2.4) BS04 CLA ? GO:0005737 ... D0VWR7 33953929
    30 7cjj:C (2.4) BS05 CLA ? GO:0005737 ... D0VWR7 33953929
    31 7cjj:C (2.4) BS06 CLA ? GO:0005737 ... D0VWR7 33953929
    32 7cjj:C (2.4) BS07 CLA ? GO:0005737 ... D0VWR7 33953929
    33 7cjj:C (2.4) BS08 CLA ? GO:0005737 ... D0VWR7 33953929
    34 7cjj:C (2.4) BS09 CLA ? GO:0005737 ... D0VWR7 33953929
    35 7cjj:C (2.4) BS10 CLA ? GO:0005737 ... D0VWR7 33953929
    36 7cjj:C (2.4) BS11 CLA ? GO:0005737 ... D0VWR7 33953929
    37 7cjj:C (2.4) BS12 CLA ? GO:0005737 ... D0VWR7 33953929
    38 7cjj:C (2.4) BS13 CLA ? GO:0005737 ... D0VWR7 33953929
    39 7cjj:C (2.4) BS14 CLA ? GO:0005737 ... D0VWR7 33953929
    40 7cjj:C (2.4) BS15 CA ? GO:0005737 ... D0VWR7 33953929
    41 7cjj:D (2.4) BS01 FE2 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    42 7cjj:D (2.4) BS02 CLA 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    43 7cjj:D (2.4) BS03 CLA 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    44 7cjj:D (2.4) BS04 PHO 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    45 7cjj:D (2.4) BS05 PHO 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    46 7cjj:D (2.4) BS06 CLA 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    47 7cjj:D (2.4) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    48 7cjj:D (2.4) BS08 CLA 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    49 7cjj:D (2.4) BS09 CLA 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    50 7cjj:E (2.4) BS01 HEM ? GO:0005506 ... P12238 33953929
    51 7cjj:F (2.4) BS01 HEM ? GO:0005506 ... P12239 33953929
    52 7cjj:H (2.4) BS01 CLA ? GO:0009523 ... P19052 33953929
    53 7cjj:H (2.4) BS02 CLA ? GO:0009523 ... P19052 33953929
    54 7cjj:H (2.4) BS03 CLA ? GO:0009523 ... P19052 33953929
    55 7cjj:I (2.4) BS01 CLA ? GO:0005737 ... P12240 33953929
    56 7cjj:J (2.4) BS01 MG ? GO:0009523 ... Q7DGD4 33953929
    57 7cjj:K (2.4) BS01 peptide ? GO:0005737 ... P19054 33953929
    58 7cjj:K (2.4) BS02 CLA ? GO:0005737 ... P19054 33953929
    59 7cjj:K (2.4) BS03 CLA ? GO:0005737 ... P19054 33953929
    60 7cjj:O (2.4) BS01 CA ? GO:0009523 ... D0VWR2 33953929
    61 7cjj:V (2.4) BS01 HEC ? GO:0005506 ... P0A387 33953929
    62 7cjj:Z (2.4) BS01 peptide ? GO:0009523 ... D0VWR5 33953929
    63 7cjj:a (2.4) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 33953929
    64 7cjj:a (2.4) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 33953929
    65 7cjj:a (2.4) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 33953929
    66 7cjj:a (2.4) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 33953929
    67 7cjj:a (2.4) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 33953929
    68 7cjj:a (2.4) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 33953929
    69 7cjj:a (2.4) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 33953929
    70 7cjj:a (2.4) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 33953929
    71 7cjj:a (2.4) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 33953929
    72 7cjj:b (2.4) BS01 CLA ? GO:0009521 ... D0VWR1 33953929
    73 7cjj:b (2.4) BS02 CLA ? GO:0009521 ... D0VWR1 33953929
    74 7cjj:b (2.4) BS03 CLA ? GO:0009521 ... D0VWR1 33953929
    75 7cjj:b (2.4) BS04 CLA ? GO:0009521 ... D0VWR1 33953929
    76 7cjj:b (2.4) BS05 CLA ? GO:0009521 ... D0VWR1 33953929
    77 7cjj:b (2.4) BS06 CLA ? GO:0009521 ... D0VWR1 33953929
    78 7cjj:b (2.4) BS07 CLA ? GO:0009521 ... D0VWR1 33953929
    79 7cjj:b (2.4) BS08 CLA ? GO:0009521 ... D0VWR1 33953929
    80 7cjj:b (2.4) BS09 CLA ? GO:0009521 ... D0VWR1 33953929
    81 7cjj:b (2.4) BS10 CLA ? GO:0009521 ... D0VWR1 33953929
    82 7cjj:b (2.4) BS11 CLA ? GO:0009521 ... D0VWR1 33953929
    83 7cjj:b (2.4) BS12 CLA ? GO:0009521 ... D0VWR1 33953929
    84 7cjj:b (2.4) BS13 CLA ? GO:0009521 ... D0VWR1 33953929
    85 7cjj:b (2.4) BS14 CLA ? GO:0009521 ... D0VWR1 33953929
    86 7cjj:b (2.4) BS15 CLA ? GO:0009521 ... D0VWR1 33953929
    87 7cjj:b (2.4) BS16 CLA ? GO:0009521 ... D0VWR1 33953929
    88 7cjj:c (2.4) BS01 OEX ? GO:0005737 ... D0VWR7 33953929
    89 7cjj:c (2.4) BS02 CLA ? GO:0005737 ... D0VWR7 33953929
    90 7cjj:c (2.4) BS03 CLA ? GO:0005737 ... D0VWR7 33953929
    91 7cjj:c (2.4) BS04 CLA ? GO:0005737 ... D0VWR7 33953929
    92 7cjj:c (2.4) BS05 CLA ? GO:0005737 ... D0VWR7 33953929
    93 7cjj:c (2.4) BS06 CLA ? GO:0005737 ... D0VWR7 33953929
    94 7cjj:c (2.4) BS07 CLA ? GO:0005737 ... D0VWR7 33953929
    95 7cjj:c (2.4) BS08 CLA ? GO:0005737 ... D0VWR7 33953929
    96 7cjj:c (2.4) BS09 CLA ? GO:0005737 ... D0VWR7 33953929
    97 7cjj:c (2.4) BS10 CLA ? GO:0005737 ... D0VWR7 33953929
    98 7cjj:c (2.4) BS11 CLA ? GO:0005737 ... D0VWR7 33953929
    99 7cjj:c (2.4) BS12 CLA ? GO:0005737 ... D0VWR7 33953929
    100 7cjj:c (2.4) BS13 CLA ? GO:0005737 ... D0VWR7 33953929
    101 7cjj:c (2.4) BS14 CLA ? GO:0005737 ... D0VWR7 33953929
    102 7cjj:c (2.4) BS15 CA ? GO:0005737 ... D0VWR7 33953929
    103 7cjj:c (2.4) BS16 CA ? GO:0005737 ... D0VWR7 33953929
    104 7cjj:d (2.4) BS01 FE2 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    105 7cjj:d (2.4) BS02 CLA 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    106 7cjj:d (2.4) BS03 CLA 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    107 7cjj:d (2.4) BS04 PHO 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    108 7cjj:d (2.4) BS05 PHO 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    109 7cjj:d (2.4) BS06 CLA 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    110 7cjj:d (2.4) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    111 7cjj:d (2.4) BS08 CLA 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    112 7cjj:d (2.4) BS09 CLA 1.10.3.9 GO:0009523 ... D0VWR8 33953929
    113 7cjj:e (2.4) BS01 HEM ? GO:0005506 ... P12238 33953929
    114 7cjj:f (2.4) BS01 HEM ? GO:0005506 ... P12239 33953929
    115 7cjj:h (2.4) BS01 CLA ? GO:0009523 ... P19052 33953929
    116 7cjj:h (2.4) BS02 CLA ? GO:0009523 ... P19052 33953929
    117 7cjj:h (2.4) BS03 CLA ? GO:0009523 ... P19052 33953929
    118 7cjj:i (2.4) BS01 CLA ? GO:0005737 ... P12240 33953929
    119 7cjj:j (2.4) BS01 MG ? GO:0009523 ... Q7DGD4 33953929
    120 7cjj:k (2.4) BS01 peptide ? GO:0005737 ... P19054 33953929
    121 7cjj:k (2.4) BS02 CLA ? GO:0005737 ... P19054 33953929
    122 7cjj:o (2.4) BS01 CA ? GO:0009523 ... D0VWR2 33953929
    123 7cjj:v (2.4) BS01 HEC ? GO:0005506 ... P0A387 33953929
    124 7cjj:z (2.4) BS01 peptide ? GO:0009523 ... D0VWR5 33953929
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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