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BioLiP
Download all results in tab-seperated text for 139 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6jln:A (2.4) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 31624207
    2 6jln:A (2.4) BS02 BCT 1.10.3.9 GO:0005506 ... P51765 31624207
    3 6jln:A (2.4) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 31624207
    4 6jln:A (2.4) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 31624207
    5 6jln:A (2.4) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 31624207
    6 6jln:A (2.4) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 31624207
    7 6jln:A (2.4) BS07 CLA 1.10.3.9 GO:0005506 ... P51765 31624207
    8 6jln:A (2.4) BS08 OEX 1.10.3.9 GO:0005506 ... P51765 31624207
    9 6jln:A (2.4) BS09 OEY 1.10.3.9 GO:0005506 ... P51765 31624207
    10 6jln:A (2.4) BS10 CLA 1.10.3.9 GO:0005506 ... P51765 31624207
    11 6jln:A (2.4) BS11 PHO 1.10.3.9 GO:0005506 ... P51765 31624207
    12 6jln:B (2.4) BS01 CLA ? GO:0009521 ... D0VWR1 31624207
    13 6jln:B (2.4) BS02 CLA ? GO:0009521 ... D0VWR1 31624207
    14 6jln:B (2.4) BS03 CLA ? GO:0009521 ... D0VWR1 31624207
    15 6jln:B (2.4) BS04 CLA ? GO:0009521 ... D0VWR1 31624207
    16 6jln:B (2.4) BS05 CLA ? GO:0009521 ... D0VWR1 31624207
    17 6jln:B (2.4) BS06 CLA ? GO:0009521 ... D0VWR1 31624207
    18 6jln:B (2.4) BS07 CLA ? GO:0009521 ... D0VWR1 31624207
    19 6jln:B (2.4) BS08 CLA ? GO:0009521 ... D0VWR1 31624207
    20 6jln:B (2.4) BS09 CLA ? GO:0009521 ... D0VWR1 31624207
    21 6jln:B (2.4) BS10 CLA ? GO:0009521 ... D0VWR1 31624207
    22 6jln:B (2.4) BS11 CLA ? GO:0009521 ... D0VWR1 31624207
    23 6jln:B (2.4) BS12 CLA ? GO:0009521 ... D0VWR1 31624207
    24 6jln:B (2.4) BS13 CLA ? GO:0009521 ... D0VWR1 31624207
    25 6jln:B (2.4) BS14 CLA ? GO:0009521 ... D0VWR1 31624207
    26 6jln:B (2.4) BS15 CLA ? GO:0009521 ... D0VWR1 31624207
    27 6jln:B (2.4) BS16 CLA ? GO:0009521 ... D0VWR1 31624207
    28 6jln:C (2.4) BS01 OEX ? GO:0005737 ... D0VWR7 31624207
    29 6jln:C (2.4) BS02 OEY ? GO:0005737 ... D0VWR7 31624207
    30 6jln:C (2.4) BS03 CLA ? GO:0005737 ... D0VWR7 31624207
    31 6jln:C (2.4) BS04 CLA ? GO:0005737 ... D0VWR7 31624207
    32 6jln:C (2.4) BS05 CLA ? GO:0005737 ... D0VWR7 31624207
    33 6jln:C (2.4) BS06 CLA ? GO:0005737 ... D0VWR7 31624207
    34 6jln:C (2.4) BS07 CLA ? GO:0005737 ... D0VWR7 31624207
    35 6jln:C (2.4) BS08 CLA ? GO:0005737 ... D0VWR7 31624207
    36 6jln:C (2.4) BS09 CLA ? GO:0005737 ... D0VWR7 31624207
    37 6jln:C (2.4) BS10 CLA ? GO:0005737 ... D0VWR7 31624207
    38 6jln:C (2.4) BS11 CLA ? GO:0005737 ... D0VWR7 31624207
    39 6jln:C (2.4) BS12 CLA ? GO:0005737 ... D0VWR7 31624207
    40 6jln:C (2.4) BS13 CLA ? GO:0005737 ... D0VWR7 31624207
    41 6jln:C (2.4) BS14 CLA ? GO:0005737 ... D0VWR7 31624207
    42 6jln:C (2.4) BS15 CLA ? GO:0005737 ... D0VWR7 31624207
    43 6jln:C (2.4) BS16 CA ? GO:0005737 ... D0VWR7 31624207
    44 6jln:D (2.4) BS01 FE2 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    45 6jln:D (2.4) BS02 BCT 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    46 6jln:D (2.4) BS03 CLA 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    47 6jln:D (2.4) BS04 CLA 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    48 6jln:D (2.4) BS05 PHO 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    49 6jln:D (2.4) BS06 CLA 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    50 6jln:D (2.4) BS07 PHO 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    51 6jln:D (2.4) BS08 CLA 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    52 6jln:D (2.4) BS09 CLA 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    53 6jln:E (2.4) BS01 HEM ? GO:0005506 ... P12238 31624207
    54 6jln:F (2.4) BS01 HEM ? GO:0005506 ... P12239 31624207
    55 6jln:H (2.4) BS01 CLA ? GO:0009523 ... P19052 31624207
    56 6jln:H (2.4) BS02 CLA ? GO:0009523 ... P19052 31624207
    57 6jln:H (2.4) BS03 CLA ? GO:0009523 ... P19052 31624207
    58 6jln:H (2.4) BS04 CLA ? GO:0009523 ... P19052 31624207
    59 6jln:I (2.4) BS01 CLA ? GO:0005737 ... P12240 31624207
    60 6jln:J (2.4) BS01 MG ? GO:0009523 ... Q7DGD4 31624207
    61 6jln:K (2.4) BS01 peptide ? GO:0005737 ... P19054 31624207
    62 6jln:K (2.4) BS02 CLA ? GO:0005737 ... P19054 31624207
    63 6jln:K (2.4) BS03 CLA ? GO:0005737 ... P19054 31624207
    64 6jln:M (2.4) BS01 CLA ? GO:0005737 ... P12312 31624207
    65 6jln:O (2.4) BS01 CA ? GO:0009523 ... D0VWR2 31624207
    66 6jln:V (2.4) BS01 HEM ? GO:0005506 ... P0A387 31624207
    67 6jln:X (2.4) BS01 CLA ? GO:0009523 ... D0VWR4 31624207
    68 6jln:Z (2.4) BS01 peptide ? GO:0009523 ... D0VWR5 31624207
    69 6jln:Z (2.4) BS02 CLA ? GO:0009523 ... D0VWR5 31624207
    70 6jln:a (2.4) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 31624207
    71 6jln:a (2.4) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 31624207
    72 6jln:a (2.4) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 31624207
    73 6jln:a (2.4) BS04 PHO 1.10.3.9 GO:0005506 ... P51765 31624207
    74 6jln:a (2.4) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 31624207
    75 6jln:a (2.4) BS06 OEX 1.10.3.9 GO:0005506 ... P51765 31624207
    76 6jln:a (2.4) BS07 OEY 1.10.3.9 GO:0005506 ... P51765 31624207
    77 6jln:a (2.4) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 31624207
    78 6jln:a (2.4) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 31624207
    79 6jln:a (2.4) BS10 PHO 1.10.3.9 GO:0005506 ... P51765 31624207
    80 6jln:a (2.4) BS11 CLA 1.10.3.9 GO:0005506 ... P51765 31624207
    81 6jln:b (2.4) BS01 CLA ? GO:0009521 ... D0VWR1 31624207
    82 6jln:b (2.4) BS02 CLA ? GO:0009521 ... D0VWR1 31624207
    83 6jln:b (2.4) BS03 CLA ? GO:0009521 ... D0VWR1 31624207
    84 6jln:b (2.4) BS04 CLA ? GO:0009521 ... D0VWR1 31624207
    85 6jln:b (2.4) BS05 CLA ? GO:0009521 ... D0VWR1 31624207
    86 6jln:b (2.4) BS06 CLA ? GO:0009521 ... D0VWR1 31624207
    87 6jln:b (2.4) BS07 CLA ? GO:0009521 ... D0VWR1 31624207
    88 6jln:b (2.4) BS08 CLA ? GO:0009521 ... D0VWR1 31624207
    89 6jln:b (2.4) BS09 CLA ? GO:0009521 ... D0VWR1 31624207
    90 6jln:b (2.4) BS10 CLA ? GO:0009521 ... D0VWR1 31624207
    91 6jln:b (2.4) BS11 CLA ? GO:0009521 ... D0VWR1 31624207
    92 6jln:b (2.4) BS12 CLA ? GO:0009521 ... D0VWR1 31624207
    93 6jln:b (2.4) BS13 CLA ? GO:0009521 ... D0VWR1 31624207
    94 6jln:b (2.4) BS14 CLA ? GO:0009521 ... D0VWR1 31624207
    95 6jln:b (2.4) BS15 CLA ? GO:0009521 ... D0VWR1 31624207
    96 6jln:b (2.4) BS16 CLA ? GO:0009521 ... D0VWR1 31624207
    97 6jln:c (2.4) BS01 OEX ? GO:0005737 ... D0VWR7 31624207
    98 6jln:c (2.4) BS02 OEY ? GO:0005737 ... D0VWR7 31624207
    99 6jln:c (2.4) BS03 CA ? GO:0005737 ... D0VWR7 31624207
    100 6jln:c (2.4) BS04 CA ? GO:0005737 ... D0VWR7 31624207
    101 6jln:c (2.4) BS05 CLA ? GO:0005737 ... D0VWR7 31624207
    102 6jln:c (2.4) BS06 CLA ? GO:0005737 ... D0VWR7 31624207
    103 6jln:c (2.4) BS07 CLA ? GO:0005737 ... D0VWR7 31624207
    104 6jln:c (2.4) BS08 CLA ? GO:0005737 ... D0VWR7 31624207
    105 6jln:c (2.4) BS09 CLA ? GO:0005737 ... D0VWR7 31624207
    106 6jln:c (2.4) BS10 CLA ? GO:0005737 ... D0VWR7 31624207
    107 6jln:c (2.4) BS11 CLA ? GO:0005737 ... D0VWR7 31624207
    108 6jln:c (2.4) BS12 CLA ? GO:0005737 ... D0VWR7 31624207
    109 6jln:c (2.4) BS13 CLA ? GO:0005737 ... D0VWR7 31624207
    110 6jln:c (2.4) BS14 CLA ? GO:0005737 ... D0VWR7 31624207
    111 6jln:c (2.4) BS15 CLA ? GO:0005737 ... D0VWR7 31624207
    112 6jln:c (2.4) BS16 CLA ? GO:0005737 ... D0VWR7 31624207
    113 6jln:c (2.4) BS17 CLA ? GO:0005737 ... D0VWR7 31624207
    114 6jln:d (2.4) BS01 FE2 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    115 6jln:d (2.4) BS02 CLA 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    116 6jln:d (2.4) BS03 PHO 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    117 6jln:d (2.4) BS04 CLA 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    118 6jln:d (2.4) BS05 BCT 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    119 6jln:d (2.4) BS06 PHO 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    120 6jln:d (2.4) BS07 CLA 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    121 6jln:d (2.4) BS08 CLA 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    122 6jln:d (2.4) BS09 CLA 1.10.3.9 GO:0009523 ... D0VWR8 31624207
    123 6jln:e (2.4) BS01 HEM ? GO:0005506 ... P12238 31624207
    124 6jln:f (2.4) BS01 HEM ? GO:0005506 ... P12239 31624207
    125 6jln:h (2.4) BS01 CLA ? GO:0009523 ... P19052 31624207
    126 6jln:h (2.4) BS02 CLA ? GO:0009523 ... P19052 31624207
    127 6jln:h (2.4) BS03 CLA ? GO:0009523 ... P19052 31624207
    128 6jln:h (2.4) BS04 CLA ? GO:0009523 ... P19052 31624207
    129 6jln:h (2.4) BS05 CLA ? GO:0009523 ... P19052 31624207
    130 6jln:i (2.4) BS01 CLA ? GO:0005737 ... P12240 31624207
    131 6jln:j (2.4) BS01 MG ? GO:0009523 ... Q7DGD4 31624207
    132 6jln:k (2.4) BS01 peptide ? GO:0005737 ... P19054 31624207
    133 6jln:k (2.4) BS02 CLA ? GO:0005737 ... P19054 31624207
    134 6jln:k (2.4) BS03 CLA ? GO:0005737 ... P19054 31624207
    135 6jln:o (2.4) BS01 CA ? GO:0009523 ... D0VWR2 31624207
    136 6jln:v (2.4) BS01 HEM ? GO:0005506 ... P0A387 31624207
    137 6jln:x (2.4) BS01 CLA ? GO:0009523 ... D0VWR4 31624207
    138 6jln:z (2.4) BS01 peptide ? GO:0009523 ... D0VWR5 31624207
    139 6jln:z (2.4) BS02 CLA ? GO:0009523 ... D0VWR5 31624207
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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