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BioLiP
Download all results in tab-seperated text for 122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6dhp:A (2.04) BS01 OEX 1.10.3.9 GO:0005506 ... P0A444 30405241
    2 6dhp:A (2.04) BS02 FE2 1.10.3.9 GO:0005506 ... P0A444 30405241
    3 6dhp:A (2.04) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 30405241
    4 6dhp:A (2.04) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 30405241
    5 6dhp:A (2.04) BS05 PHO 1.10.3.9 GO:0005506 ... P0A444 30405241
    6 6dhp:A (2.04) BS06 PHO 1.10.3.9 GO:0005506 ... P0A444 30405241
    7 6dhp:A (2.04) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 30405241
    8 6dhp:A (2.04) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 30405241
    9 6dhp:A (2.04) BS09 OEY 1.10.3.9 GO:0005506 ... P0A444 30405241
    10 6dhp:A (2.04) BS10 CLA 1.10.3.9 GO:0005506 ... P0A444 30405241
    11 6dhp:A (2.04) BS11 BCT 1.10.3.9 GO:0005506 ... P0A444 30405241
    12 6dhp:B (2.04) BS01 CLA ? GO:0009521 ... Q8DIQ1 30405241
    13 6dhp:B (2.04) BS02 CLA ? GO:0009521 ... Q8DIQ1 30405241
    14 6dhp:B (2.04) BS03 CLA ? GO:0009521 ... Q8DIQ1 30405241
    15 6dhp:B (2.04) BS04 CLA ? GO:0009521 ... Q8DIQ1 30405241
    16 6dhp:B (2.04) BS05 CLA ? GO:0009521 ... Q8DIQ1 30405241
    17 6dhp:B (2.04) BS06 CLA ? GO:0009521 ... Q8DIQ1 30405241
    18 6dhp:B (2.04) BS07 CLA ? GO:0009521 ... Q8DIQ1 30405241
    19 6dhp:B (2.04) BS08 CLA ? GO:0009521 ... Q8DIQ1 30405241
    20 6dhp:B (2.04) BS09 CLA ? GO:0009521 ... Q8DIQ1 30405241
    21 6dhp:B (2.04) BS10 CLA ? GO:0009521 ... Q8DIQ1 30405241
    22 6dhp:B (2.04) BS11 CLA ? GO:0009521 ... Q8DIQ1 30405241
    23 6dhp:B (2.04) BS12 CLA ? GO:0009521 ... Q8DIQ1 30405241
    24 6dhp:B (2.04) BS13 CLA ? GO:0009521 ... Q8DIQ1 30405241
    25 6dhp:B (2.04) BS14 CLA ? GO:0009521 ... Q8DIQ1 30405241
    26 6dhp:B (2.04) BS15 CLA ? GO:0009521 ... Q8DIQ1 30405241
    27 6dhp:B (2.04) BS16 CLA ? GO:0009521 ... Q8DIQ1 30405241
    28 6dhp:C (2.04) BS01 OEX ? GO:0005737 ... Q8DIF8 30405241
    29 6dhp:C (2.04) BS02 OEY ? GO:0005737 ... Q8DIF8 30405241
    30 6dhp:C (2.04) BS03 CLA ? GO:0005737 ... Q8DIF8 30405241
    31 6dhp:C (2.04) BS04 CLA ? GO:0005737 ... Q8DIF8 30405241
    32 6dhp:C (2.04) BS05 CLA ? GO:0005737 ... Q8DIF8 30405241
    33 6dhp:C (2.04) BS06 CLA ? GO:0005737 ... Q8DIF8 30405241
    34 6dhp:C (2.04) BS07 CLA ? GO:0005737 ... Q8DIF8 30405241
    35 6dhp:C (2.04) BS08 CLA ? GO:0005737 ... Q8DIF8 30405241
    36 6dhp:C (2.04) BS09 CLA ? GO:0005737 ... Q8DIF8 30405241
    37 6dhp:C (2.04) BS10 CLA ? GO:0005737 ... Q8DIF8 30405241
    38 6dhp:C (2.04) BS11 CLA ? GO:0005737 ... Q8DIF8 30405241
    39 6dhp:C (2.04) BS12 CLA ? GO:0005737 ... Q8DIF8 30405241
    40 6dhp:C (2.04) BS13 CLA ? GO:0005737 ... Q8DIF8 30405241
    41 6dhp:C (2.04) BS14 CLA ? GO:0005737 ... Q8DIF8 30405241
    42 6dhp:C (2.04) BS15 CLA ? GO:0005737 ... Q8DIF8 30405241
    43 6dhp:D (2.04) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    44 6dhp:D (2.04) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    45 6dhp:D (2.04) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    46 6dhp:D (2.04) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    47 6dhp:D (2.04) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    48 6dhp:D (2.04) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    49 6dhp:D (2.04) BS07 BCT 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    50 6dhp:D (2.04) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    51 6dhp:D (2.04) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    52 6dhp:E (2.04) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    53 6dhp:F (2.04) BS01 HEM ? GO:0009523 ... Q8DIN9 30405241
    54 6dhp:H (2.04) BS01 CLA ? GO:0009523 ... Q8DJ43 30405241
    55 6dhp:H (2.04) BS02 CLA ? GO:0009523 ... Q8DJ43 30405241
    56 6dhp:H (2.04) BS03 CLA ? GO:0009523 ... Q8DJ43 30405241
    57 6dhp:H (2.04) BS04 CLA ? GO:0009523 ... Q8DJ43 30405241
    58 6dhp:I (2.04) BS01 CLA ? GO:0005737 ... Q8DJZ6 30405241
    59 6dhp:I (2.04) BS02 CLA ? GO:0005737 ... Q8DJZ6 30405241
    60 6dhp:K (2.04) BS01 peptide ? GO:0009523 ... Q9F1K9 30405241
    61 6dhp:K (2.04) BS02 CLA ? GO:0009523 ... Q9F1K9 30405241
    62 6dhp:V (2.04) BS01 HEC ? GO:0005506 ... P0A386 30405241
    63 6dhp:X (2.04) BS01 CLA ? GO:0009523 ... Q9F1R6 30405241
    64 6dhp:Z (2.04) BS01 peptide ? GO:0009523 ... Q8DHJ2 30405241
    65 6dhp:a (2.04) BS01 OEX 1.10.3.9 GO:0005506 ... P0A444 30405241
    66 6dhp:a (2.04) BS02 FE2 1.10.3.9 GO:0005506 ... P0A444 30405241
    67 6dhp:a (2.04) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 30405241
    68 6dhp:a (2.04) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 30405241
    69 6dhp:a (2.04) BS05 PHO 1.10.3.9 GO:0005506 ... P0A444 30405241
    70 6dhp:a (2.04) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 30405241
    71 6dhp:a (2.04) BS07 BCT 1.10.3.9 GO:0005506 ... P0A444 30405241
    72 6dhp:a (2.04) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 30405241
    73 6dhp:a (2.04) BS09 OEY 1.10.3.9 GO:0005506 ... P0A444 30405241
    74 6dhp:a (2.04) BS10 PHO 1.10.3.9 GO:0005506 ... P0A444 30405241
    75 6dhp:b (2.04) BS01 CLA ? GO:0009521 ... Q8DIQ1 30405241
    76 6dhp:b (2.04) BS02 CLA ? GO:0009521 ... Q8DIQ1 30405241
    77 6dhp:b (2.04) BS03 CLA ? GO:0009521 ... Q8DIQ1 30405241
    78 6dhp:b (2.04) BS04 CLA ? GO:0009521 ... Q8DIQ1 30405241
    79 6dhp:b (2.04) BS05 CLA ? GO:0009521 ... Q8DIQ1 30405241
    80 6dhp:b (2.04) BS06 CLA ? GO:0009521 ... Q8DIQ1 30405241
    81 6dhp:b (2.04) BS07 CLA ? GO:0009521 ... Q8DIQ1 30405241
    82 6dhp:b (2.04) BS08 CLA ? GO:0009521 ... Q8DIQ1 30405241
    83 6dhp:b (2.04) BS09 CLA ? GO:0009521 ... Q8DIQ1 30405241
    84 6dhp:b (2.04) BS10 CLA ? GO:0009521 ... Q8DIQ1 30405241
    85 6dhp:b (2.04) BS11 CLA ? GO:0009521 ... Q8DIQ1 30405241
    86 6dhp:b (2.04) BS12 CLA ? GO:0009521 ... Q8DIQ1 30405241
    87 6dhp:b (2.04) BS13 CLA ? GO:0009521 ... Q8DIQ1 30405241
    88 6dhp:b (2.04) BS14 CLA ? GO:0009521 ... Q8DIQ1 30405241
    89 6dhp:b (2.04) BS15 CLA ? GO:0009521 ... Q8DIQ1 30405241
    90 6dhp:b (2.04) BS16 CLA ? GO:0009521 ... Q8DIQ1 30405241
    91 6dhp:c (2.04) BS01 OEX ? GO:0005737 ... Q8DIF8 30405241
    92 6dhp:c (2.04) BS02 OEY ? GO:0005737 ... Q8DIF8 30405241
    93 6dhp:c (2.04) BS03 CLA ? GO:0005737 ... Q8DIF8 30405241
    94 6dhp:c (2.04) BS04 CLA ? GO:0005737 ... Q8DIF8 30405241
    95 6dhp:c (2.04) BS05 CLA ? GO:0005737 ... Q8DIF8 30405241
    96 6dhp:c (2.04) BS06 CLA ? GO:0005737 ... Q8DIF8 30405241
    97 6dhp:c (2.04) BS07 CLA ? GO:0005737 ... Q8DIF8 30405241
    98 6dhp:c (2.04) BS08 CLA ? GO:0005737 ... Q8DIF8 30405241
    99 6dhp:c (2.04) BS09 CLA ? GO:0005737 ... Q8DIF8 30405241
    100 6dhp:c (2.04) BS10 CLA ? GO:0005737 ... Q8DIF8 30405241
    101 6dhp:c (2.04) BS11 CLA ? GO:0005737 ... Q8DIF8 30405241
    102 6dhp:c (2.04) BS12 CLA ? GO:0005737 ... Q8DIF8 30405241
    103 6dhp:c (2.04) BS13 CLA ? GO:0005737 ... Q8DIF8 30405241
    104 6dhp:c (2.04) BS14 CLA ? GO:0005737 ... Q8DIF8 30405241
    105 6dhp:c (2.04) BS15 CLA ? GO:0005737 ... Q8DIF8 30405241
    106 6dhp:d (2.04) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    107 6dhp:d (2.04) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    108 6dhp:d (2.04) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    109 6dhp:d (2.04) BS04 BCT 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    110 6dhp:d (2.04) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    111 6dhp:d (2.04) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    112 6dhp:d (2.04) BS07 PHO 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    113 6dhp:d (2.04) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    114 6dhp:d (2.04) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30405241
    115 6dhp:e (2.04) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    116 6dhp:f (2.04) BS01 HEM ? GO:0009523 ... Q8DIN9 30405241
    117 6dhp:h (2.04) BS01 CLA ? GO:0009523 ... Q8DJ43 30405241
    118 6dhp:h (2.04) BS02 CLA ? GO:0009523 ... Q8DJ43 30405241
    119 6dhp:h (2.04) BS03 CLA ? GO:0009523 ... Q8DJ43 30405241
    120 6dhp:i (2.04) BS01 CLA ? GO:0005737 ... Q8DJZ6 30405241
    121 6dhp:k (2.04) BS01 CLA ? GO:0009523 ... Q9F1K9 30405241
    122 6dhp:v (2.04) BS01 HEC ? GO:0005506 ... P0A386 30405241
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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