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BioLiP
Download all results in tab-seperated text for 130 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5zzn:A (2.1) BS01 OEX 1.10.3.9 GO:0005506 ... P0A444 30076221
    2 5zzn:A (2.1) BS02 CLA 1.10.3.9 GO:0005506 ... P0A444 30076221
    3 5zzn:A (2.1) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 30076221
    4 5zzn:A (2.1) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 30076221
    5 5zzn:A (2.1) BS05 PHO 1.10.3.9 GO:0005506 ... P0A444 30076221
    6 5zzn:A (2.1) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 30076221
    7 5zzn:A (2.1) BS07 FE2 1.10.3.9 GO:0005506 ... P0A444 30076221
    8 5zzn:A (2.1) BS08 BCT 1.10.3.9 GO:0005506 ... P0A444 30076221
    9 5zzn:A (2.1) BS09 PHO 1.10.3.9 GO:0005506 ... P0A444 30076221
    10 5zzn:B (2.1) BS01 CLA ? GO:0009521 ... Q8DIQ1 30076221
    11 5zzn:B (2.1) BS02 CLA ? GO:0009521 ... Q8DIQ1 30076221
    12 5zzn:B (2.1) BS03 CLA ? GO:0009521 ... Q8DIQ1 30076221
    13 5zzn:B (2.1) BS04 CLA ? GO:0009521 ... Q8DIQ1 30076221
    14 5zzn:B (2.1) BS05 CLA ? GO:0009521 ... Q8DIQ1 30076221
    15 5zzn:B (2.1) BS06 CLA ? GO:0009521 ... Q8DIQ1 30076221
    16 5zzn:B (2.1) BS07 CLA ? GO:0009521 ... Q8DIQ1 30076221
    17 5zzn:B (2.1) BS08 CLA ? GO:0009521 ... Q8DIQ1 30076221
    18 5zzn:B (2.1) BS09 CLA ? GO:0009521 ... Q8DIQ1 30076221
    19 5zzn:B (2.1) BS10 CLA ? GO:0009521 ... Q8DIQ1 30076221
    20 5zzn:B (2.1) BS11 CLA ? GO:0009521 ... Q8DIQ1 30076221
    21 5zzn:B (2.1) BS12 CLA ? GO:0009521 ... Q8DIQ1 30076221
    22 5zzn:B (2.1) BS13 CLA ? GO:0009521 ... Q8DIQ1 30076221
    23 5zzn:B (2.1) BS14 CLA ? GO:0009521 ... Q8DIQ1 30076221
    24 5zzn:B (2.1) BS15 CLA ? GO:0009521 ... Q8DIQ1 30076221
    25 5zzn:B (2.1) BS16 CLA ? GO:0009521 ... Q8DIQ1 30076221
    26 5zzn:C (2.1) BS01 OEX ? GO:0005737 ... Q8DIF8 30076221
    27 5zzn:C (2.1) BS02 CLA ? GO:0005737 ... Q8DIF8 30076221
    28 5zzn:C (2.1) BS03 CLA ? GO:0005737 ... Q8DIF8 30076221
    29 5zzn:C (2.1) BS04 CLA ? GO:0005737 ... Q8DIF8 30076221
    30 5zzn:C (2.1) BS05 CLA ? GO:0005737 ... Q8DIF8 30076221
    31 5zzn:C (2.1) BS06 CLA ? GO:0005737 ... Q8DIF8 30076221
    32 5zzn:C (2.1) BS07 CLA ? GO:0005737 ... Q8DIF8 30076221
    33 5zzn:C (2.1) BS08 CLA ? GO:0005737 ... Q8DIF8 30076221
    34 5zzn:C (2.1) BS09 CLA ? GO:0005737 ... Q8DIF8 30076221
    35 5zzn:C (2.1) BS10 CLA ? GO:0005737 ... Q8DIF8 30076221
    36 5zzn:C (2.1) BS11 CLA ? GO:0005737 ... Q8DIF8 30076221
    37 5zzn:C (2.1) BS12 CLA ? GO:0005737 ... Q8DIF8 30076221
    38 5zzn:C (2.1) BS13 CLA ? GO:0005737 ... Q8DIF8 30076221
    39 5zzn:C (2.1) BS14 CLA ? GO:0005737 ... Q8DIF8 30076221
    40 5zzn:C (2.1) BS15 GOL ? GO:0005737 ... Q8DIF8 30076221
    41 5zzn:D (2.1) BS01 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    42 5zzn:D (2.1) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    43 5zzn:D (2.1) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    44 5zzn:D (2.1) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    45 5zzn:D (2.1) BS05 FE2 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    46 5zzn:D (2.1) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    47 5zzn:D (2.1) BS07 PHO 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    48 5zzn:D (2.1) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    49 5zzn:E (2.1) BS01 HEM ? GO:0005506 ... Q8DIP0 30076221
    50 5zzn:F (2.1) BS01 HEM ? GO:0009523 ... Q8DIN9 30076221
    51 5zzn:H (2.1) BS01 CLA ? GO:0009523 ... Q8DJ43 30076221
    52 5zzn:H (2.1) BS02 CLA ? GO:0009523 ... Q8DJ43 30076221
    53 5zzn:H (2.1) BS03 CLA ? GO:0009523 ... Q8DJ43 30076221
    54 5zzn:H (2.1) BS04 RRX ? GO:0009523 ... Q8DJ43 30076221
    55 5zzn:I (2.1) BS01 CLA ? GO:0005737 ... Q8DJZ6 30076221
    56 5zzn:J (2.1) BS01 MG ? GO:0009523 ... P59087 30076221
    57 5zzn:K (2.1) BS01 peptide ? GO:0009523 ... Q9F1K9 30076221
    58 5zzn:K (2.1) BS02 CLA ? GO:0009523 ... Q9F1K9 30076221
    59 5zzn:K (2.1) BS03 CLA ? GO:0009523 ... Q9F1K9 30076221
    60 5zzn:K (2.1) BS04 MG ? GO:0009523 ... Q9F1K9 30076221
    61 5zzn:O (2.1) BS01 CA ? GO:0009523 ... P0A431 30076221
    62 5zzn:V (2.1) BS01 HEC ? GO:0005506 ... P0A386 30076221
    63 5zzn:Z (2.1) BS01 peptide ? GO:0009523 ... Q8DHJ2 30076221
    64 5zzn:a (2.1) BS01 OEX 1.10.3.9 GO:0005506 ... P0A444 30076221
    65 5zzn:a (2.1) BS02 FE2 1.10.3.9 GO:0005506 ... P0A444 30076221
    66 5zzn:a (2.1) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 30076221
    67 5zzn:a (2.1) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 30076221
    68 5zzn:a (2.1) BS05 PHO 1.10.3.9 GO:0005506 ... P0A444 30076221
    69 5zzn:a (2.1) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 30076221
    70 5zzn:a (2.1) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 30076221
    71 5zzn:a (2.1) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 30076221
    72 5zzn:a (2.1) BS09 PHO 1.10.3.9 GO:0005506 ... P0A444 30076221
    73 5zzn:b (2.1) BS01 CLA ? GO:0009521 ... Q8DIQ1 30076221
    74 5zzn:b (2.1) BS02 CLA ? GO:0009521 ... Q8DIQ1 30076221
    75 5zzn:b (2.1) BS03 CLA ? GO:0009521 ... Q8DIQ1 30076221
    76 5zzn:b (2.1) BS04 CLA ? GO:0009521 ... Q8DIQ1 30076221
    77 5zzn:b (2.1) BS05 CLA ? GO:0009521 ... Q8DIQ1 30076221
    78 5zzn:b (2.1) BS06 CLA ? GO:0009521 ... Q8DIQ1 30076221
    79 5zzn:b (2.1) BS07 CLA ? GO:0009521 ... Q8DIQ1 30076221
    80 5zzn:b (2.1) BS08 CLA ? GO:0009521 ... Q8DIQ1 30076221
    81 5zzn:b (2.1) BS09 CLA ? GO:0009521 ... Q8DIQ1 30076221
    82 5zzn:b (2.1) BS10 CLA ? GO:0009521 ... Q8DIQ1 30076221
    83 5zzn:b (2.1) BS11 CLA ? GO:0009521 ... Q8DIQ1 30076221
    84 5zzn:b (2.1) BS12 CLA ? GO:0009521 ... Q8DIQ1 30076221
    85 5zzn:b (2.1) BS13 CLA ? GO:0009521 ... Q8DIQ1 30076221
    86 5zzn:b (2.1) BS14 CLA ? GO:0009521 ... Q8DIQ1 30076221
    87 5zzn:b (2.1) BS15 CLA ? GO:0009521 ... Q8DIQ1 30076221
    88 5zzn:b (2.1) BS16 CLA ? GO:0009521 ... Q8DIQ1 30076221
    89 5zzn:c (2.1) BS01 OEX ? GO:0005737 ... Q8DIF8 30076221
    90 5zzn:c (2.1) BS02 CA ? GO:0005737 ... Q8DIF8 30076221
    91 5zzn:c (2.1) BS03 CLA ? GO:0005737 ... Q8DIF8 30076221
    92 5zzn:c (2.1) BS04 CLA ? GO:0005737 ... Q8DIF8 30076221
    93 5zzn:c (2.1) BS05 CLA ? GO:0005737 ... Q8DIF8 30076221
    94 5zzn:c (2.1) BS06 CLA ? GO:0005737 ... Q8DIF8 30076221
    95 5zzn:c (2.1) BS07 CLA ? GO:0005737 ... Q8DIF8 30076221
    96 5zzn:c (2.1) BS08 CLA ? GO:0005737 ... Q8DIF8 30076221
    97 5zzn:c (2.1) BS09 CLA ? GO:0005737 ... Q8DIF8 30076221
    98 5zzn:c (2.1) BS10 CLA ? GO:0005737 ... Q8DIF8 30076221
    99 5zzn:c (2.1) BS11 CLA ? GO:0005737 ... Q8DIF8 30076221
    100 5zzn:c (2.1) BS12 CLA ? GO:0005737 ... Q8DIF8 30076221
    101 5zzn:c (2.1) BS13 CLA ? GO:0005737 ... Q8DIF8 30076221
    102 5zzn:c (2.1) BS14 CLA ? GO:0005737 ... Q8DIF8 30076221
    103 5zzn:c (2.1) BS15 CLA ? GO:0005737 ... Q8DIF8 30076221
    104 5zzn:c (2.1) BS16 GOL ? GO:0005737 ... Q8DIF8 30076221
    105 5zzn:d (2.1) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    106 5zzn:d (2.1) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    107 5zzn:d (2.1) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    108 5zzn:d (2.1) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    109 5zzn:d (2.1) BS05 BCT 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    110 5zzn:d (2.1) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    111 5zzn:d (2.1) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    112 5zzn:d (2.1) BS08 PHO 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    113 5zzn:d (2.1) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 30076221
    114 5zzn:e (2.1) BS01 HEM ? GO:0005506 ... Q8DIP0 30076221
    115 5zzn:f (2.1) BS01 HEM ? GO:0009523 ... Q8DIN9 30076221
    116 5zzn:h (2.1) BS01 CLA ? GO:0009523 ... Q8DJ43 30076221
    117 5zzn:h (2.1) BS02 CLA ? GO:0009523 ... Q8DJ43 30076221
    118 5zzn:h (2.1) BS03 CLA ? GO:0009523 ... Q8DJ43 30076221
    119 5zzn:h (2.1) BS04 RRX ? GO:0009523 ... Q8DJ43 30076221
    120 5zzn:i (2.1) BS01 CLA ? GO:0005737 ... Q8DJZ6 30076221
    121 5zzn:j (2.1) BS01 MG ? GO:0009523 ... P59087 30076221
    122 5zzn:k (2.1) BS01 peptide ? GO:0009523 ... Q9F1K9 30076221
    123 5zzn:k (2.1) BS02 CLA ? GO:0009523 ... Q9F1K9 30076221
    124 5zzn:k (2.1) BS03 CLA ? GO:0009523 ... Q9F1K9 30076221
    125 5zzn:k (2.1) BS04 MG ? GO:0009523 ... Q9F1K9 30076221
    126 5zzn:o (2.1) BS01 CA ? GO:0009523 ... P0A431 30076221
    127 5zzn:v (2.1) BS01 HEC ? GO:0005506 ... P0A386 30076221
    128 5zzn:x (2.1) BS01 CLA ? GO:0009523 ... Q9F1R6 30076221
    129 5zzn:x (2.1) BS02 RRX ? GO:0009523 ... Q9F1R6 30076221
    130 5zzn:z (2.1) BS01 peptide ? GO:0009523 ... Q8DHJ2 30076221
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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