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BioLiP
Download all results in tab-seperated text for 126 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8ez5:A (2.09) BS01 OEY 1.10.3.9 GO:0005506 ... P0A444 37138085
    2 8ez5:A (2.09) BS02 OEX 1.10.3.9 GO:0005506 ... P0A444 37138085
    3 8ez5:A (2.09) BS03 FE2 1.10.3.9 GO:0005506 ... P0A444 37138085
    4 8ez5:A (2.09) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    5 8ez5:A (2.09) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    6 8ez5:A (2.09) BS06 PHO 1.10.3.9 GO:0005506 ... P0A444 37138085
    7 8ez5:A (2.09) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    8 8ez5:A (2.09) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    9 8ez5:A (2.09) BS09 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    10 8ez5:A (2.09) BS10 PHO 1.10.3.9 GO:0005506 ... P0A444 37138085
    11 8ez5:A (2.09) BS11 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    12 8ez5:B (2.09) BS01 CLA ? GO:0009521 ... Q8DIQ1 37138085
    13 8ez5:B (2.09) BS02 CLA ? GO:0009521 ... Q8DIQ1 37138085
    14 8ez5:B (2.09) BS03 CLA ? GO:0009521 ... Q8DIQ1 37138085
    15 8ez5:B (2.09) BS04 CLA ? GO:0009521 ... Q8DIQ1 37138085
    16 8ez5:B (2.09) BS05 CLA ? GO:0009521 ... Q8DIQ1 37138085
    17 8ez5:B (2.09) BS06 CLA ? GO:0009521 ... Q8DIQ1 37138085
    18 8ez5:B (2.09) BS07 CLA ? GO:0009521 ... Q8DIQ1 37138085
    19 8ez5:B (2.09) BS08 CLA ? GO:0009521 ... Q8DIQ1 37138085
    20 8ez5:B (2.09) BS09 CLA ? GO:0009521 ... Q8DIQ1 37138085
    21 8ez5:B (2.09) BS10 CLA ? GO:0009521 ... Q8DIQ1 37138085
    22 8ez5:B (2.09) BS11 CLA ? GO:0009521 ... Q8DIQ1 37138085
    23 8ez5:B (2.09) BS12 CLA ? GO:0009521 ... Q8DIQ1 37138085
    24 8ez5:B (2.09) BS13 CLA ? GO:0009521 ... Q8DIQ1 37138085
    25 8ez5:B (2.09) BS14 CLA ? GO:0009521 ... Q8DIQ1 37138085
    26 8ez5:B (2.09) BS15 CLA ? GO:0009521 ... Q8DIQ1 37138085
    27 8ez5:B (2.09) BS16 CLA ? GO:0009521 ... Q8DIQ1 37138085
    28 8ez5:C (2.09) BS01 OEY ? GO:0005737 ... Q8DIF8 37138085
    29 8ez5:C (2.09) BS02 OEX ? GO:0005737 ... Q8DIF8 37138085
    30 8ez5:C (2.09) BS03 CLA ? GO:0005737 ... Q8DIF8 37138085
    31 8ez5:C (2.09) BS04 CLA ? GO:0005737 ... Q8DIF8 37138085
    32 8ez5:C (2.09) BS05 CLA ? GO:0005737 ... Q8DIF8 37138085
    33 8ez5:C (2.09) BS06 CLA ? GO:0005737 ... Q8DIF8 37138085
    34 8ez5:C (2.09) BS07 CLA ? GO:0005737 ... Q8DIF8 37138085
    35 8ez5:C (2.09) BS08 CLA ? GO:0005737 ... Q8DIF8 37138085
    36 8ez5:C (2.09) BS09 CLA ? GO:0005737 ... Q8DIF8 37138085
    37 8ez5:C (2.09) BS10 CLA ? GO:0005737 ... Q8DIF8 37138085
    38 8ez5:C (2.09) BS11 CLA ? GO:0005737 ... Q8DIF8 37138085
    39 8ez5:C (2.09) BS12 CLA ? GO:0005737 ... Q8DIF8 37138085
    40 8ez5:C (2.09) BS13 CLA ? GO:0005737 ... Q8DIF8 37138085
    41 8ez5:C (2.09) BS14 CLA ? GO:0005737 ... Q8DIF8 37138085
    42 8ez5:C (2.09) BS15 CLA ? GO:0005737 ... Q8DIF8 37138085
    43 8ez5:D (2.09) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    44 8ez5:D (2.09) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    45 8ez5:D (2.09) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    46 8ez5:D (2.09) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    47 8ez5:D (2.09) BS05 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    48 8ez5:D (2.09) BS06 PHO 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    49 8ez5:D (2.09) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    50 8ez5:D (2.09) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    51 8ez5:D (2.09) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    52 8ez5:E (2.09) BS01 HEM ? GO:0005506 ... Q8DIP0 37138085
    53 8ez5:F (2.09) BS01 HEM ? GO:0005506 ... Q8DIN9 37138085
    54 8ez5:H (2.09) BS01 CLA ? GO:0009523 ... Q8DJ43 37138085
    55 8ez5:H (2.09) BS02 CLA ? GO:0009523 ... Q8DJ43 37138085
    56 8ez5:H (2.09) BS03 CLA ? GO:0009523 ... Q8DJ43 37138085
    57 8ez5:I (2.09) BS01 CLA ? GO:0005737 ... Q8DJZ6 37138085
    58 8ez5:K (2.09) BS01 peptide ? GO:0005737 ... Q9F1K9 37138085
    59 8ez5:K (2.09) BS02 CLA ? GO:0005737 ... Q9F1K9 37138085
    60 8ez5:K (2.09) BS03 CLA ? GO:0005737 ... Q9F1K9 37138085
    61 8ez5:V (2.09) BS01 HEC ? GO:0005506 ... P0A386 37138085
    62 8ez5:X (2.09) BS01 CLA ? GO:0009523 ... Q9F1R6 37138085
    63 8ez5:Z (2.09) BS01 peptide ? GO:0009523 ... Q8DHJ2 37138085
    64 8ez5:a (2.09) BS01 OEY 1.10.3.9 GO:0005506 ... P0A444 37138085
    65 8ez5:a (2.09) BS02 OEX 1.10.3.9 GO:0005506 ... P0A444 37138085
    66 8ez5:a (2.09) BS03 FE2 1.10.3.9 GO:0005506 ... P0A444 37138085
    67 8ez5:a (2.09) BS04 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    68 8ez5:a (2.09) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    69 8ez5:a (2.09) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    70 8ez5:a (2.09) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    71 8ez5:a (2.09) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    72 8ez5:a (2.09) BS09 CLA 1.10.3.9 GO:0005506 ... P0A444 37138085
    73 8ez5:a (2.09) BS10 PHO 1.10.3.9 GO:0005506 ... P0A444 37138085
    74 8ez5:a (2.09) BS11 PHO 1.10.3.9 GO:0005506 ... P0A444 37138085
    75 8ez5:b (2.09) BS01 CLA ? GO:0009521 ... Q8DIQ1 37138085
    76 8ez5:b (2.09) BS02 CLA ? GO:0009521 ... Q8DIQ1 37138085
    77 8ez5:b (2.09) BS03 CLA ? GO:0009521 ... Q8DIQ1 37138085
    78 8ez5:b (2.09) BS04 CLA ? GO:0009521 ... Q8DIQ1 37138085
    79 8ez5:b (2.09) BS05 CLA ? GO:0009521 ... Q8DIQ1 37138085
    80 8ez5:b (2.09) BS06 CLA ? GO:0009521 ... Q8DIQ1 37138085
    81 8ez5:b (2.09) BS07 CLA ? GO:0009521 ... Q8DIQ1 37138085
    82 8ez5:b (2.09) BS08 CLA ? GO:0009521 ... Q8DIQ1 37138085
    83 8ez5:b (2.09) BS09 CLA ? GO:0009521 ... Q8DIQ1 37138085
    84 8ez5:b (2.09) BS10 CLA ? GO:0009521 ... Q8DIQ1 37138085
    85 8ez5:b (2.09) BS11 CLA ? GO:0009521 ... Q8DIQ1 37138085
    86 8ez5:b (2.09) BS12 CLA ? GO:0009521 ... Q8DIQ1 37138085
    87 8ez5:b (2.09) BS13 CLA ? GO:0009521 ... Q8DIQ1 37138085
    88 8ez5:b (2.09) BS14 CLA ? GO:0009521 ... Q8DIQ1 37138085
    89 8ez5:b (2.09) BS15 CLA ? GO:0009521 ... Q8DIQ1 37138085
    90 8ez5:b (2.09) BS16 CLA ? GO:0009521 ... Q8DIQ1 37138085
    91 8ez5:c (2.09) BS01 OEY ? GO:0005737 ... Q8DIF8 37138085
    92 8ez5:c (2.09) BS02 OEX ? GO:0005737 ... Q8DIF8 37138085
    93 8ez5:c (2.09) BS03 CLA ? GO:0005737 ... Q8DIF8 37138085
    94 8ez5:c (2.09) BS04 CLA ? GO:0005737 ... Q8DIF8 37138085
    95 8ez5:c (2.09) BS05 CLA ? GO:0005737 ... Q8DIF8 37138085
    96 8ez5:c (2.09) BS06 CLA ? GO:0005737 ... Q8DIF8 37138085
    97 8ez5:c (2.09) BS07 CLA ? GO:0005737 ... Q8DIF8 37138085
    98 8ez5:c (2.09) BS08 CLA ? GO:0005737 ... Q8DIF8 37138085
    99 8ez5:c (2.09) BS09 CLA ? GO:0005737 ... Q8DIF8 37138085
    100 8ez5:c (2.09) BS10 CLA ? GO:0005737 ... Q8DIF8 37138085
    101 8ez5:c (2.09) BS11 CLA ? GO:0005737 ... Q8DIF8 37138085
    102 8ez5:c (2.09) BS12 CLA ? GO:0005737 ... Q8DIF8 37138085
    103 8ez5:c (2.09) BS13 CLA ? GO:0005737 ... Q8DIF8 37138085
    104 8ez5:c (2.09) BS14 CLA ? GO:0005737 ... Q8DIF8 37138085
    105 8ez5:c (2.09) BS15 CLA ? GO:0005737 ... Q8DIF8 37138085
    106 8ez5:d (2.09) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    107 8ez5:d (2.09) BS02 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    108 8ez5:d (2.09) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    109 8ez5:d (2.09) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    110 8ez5:d (2.09) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    111 8ez5:d (2.09) BS06 PHO 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    112 8ez5:d (2.09) BS07 PHO 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    113 8ez5:d (2.09) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    114 8ez5:d (2.09) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    115 8ez5:e (2.09) BS01 HEM ? GO:0005506 ... Q8DIP0 37138085
    116 8ez5:f (2.09) BS01 HEM ? GO:0005506 ... Q8DIN9 37138085
    117 8ez5:h (2.09) BS01 CLA ? GO:0009523 ... Q8DJ43 37138085
    118 8ez5:h (2.09) BS02 CLA ? GO:0009523 ... Q8DJ43 37138085
    119 8ez5:h (2.09) BS03 CLA ? GO:0009523 ... Q8DJ43 37138085
    120 8ez5:h (2.09) BS04 CLA ? GO:0009523 ... Q8DJ43 37138085
    121 8ez5:h (2.09) BS05 CLA ? GO:0009523 ... Q8DJ43 37138085
    122 8ez5:i (2.09) BS01 CLA ? GO:0005737 ... Q8DJZ6 37138085
    123 8ez5:k (2.09) BS01 CLA ? GO:0005737 ... Q9F1K9 37138085
    124 8ez5:k (2.09) BS02 CLA ? GO:0005737 ... Q9F1K9 37138085
    125 8ez5:v (2.09) BS01 HEC ? GO:0005506 ... P0A386 37138085
    126 8ez5:x (2.09) BS01 CLA ? GO:0009523 ... Q9F1R6 37138085
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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